KEGG   Clostridium cochlearium: SAMEA4530647_0562
Entry
SAMEA4530647_0562 CDS       T06756                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ccoh  Clostridium cochlearium
Pathway
ccoh00740  Riboflavin metabolism
ccoh01100  Metabolic pathways
ccoh01110  Biosynthesis of secondary metabolites
ccoh01240  Biosynthesis of cofactors
ccoh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SAMEA4530647_0562 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMEA4530647_0562 (ribD)
Enzymes [BR:ccoh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SAMEA4530647_0562 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SAMEA4530647_0562 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: SNV69983
LinkDB
Position
1:553702..554784
AA seq 360 aa
MDEIYMKMAIELAHLGEGYVNPNPLVGAVIVKDGKVIGEGYHKKFGEAHAEIDAFKNCKE
DPKGGTLYVNLEPCSHYGKTPPCVEGIIKKGIKKVVIGMKDPNPLVAGKGIEILKKANIK
VEVGVLEDECRKLNEIFIKYITHKKPFCILKWASTLDGKICSPIGDSKWITGEDSREYVH
LIRNKVSSIMVGVNTIIKDNPSLTTRLKDRKGVNSTRIIVDSKGRTPLDARIFKEEGDAF
IATTSQIQEKKRKEFEKIGAKIIITPEKDGKIDLQYLVNYLAEINIDSVLLEGGGTLNYS
ALKEGIVDKALIFIAPKILGGENSKTPVEGEGTKYVKDCIKLKNLSIKNFKEDILIEGFI
NT seq 1083 nt   +upstreamnt  +downstreamnt
ttggatgaaatttatatgaaaatggcaattgaactagcacacttgggtgaaggatatgta
aatcctaatcctttagtaggagcagttatagtaaaggacggaaaggtaataggagaagga
taccataaaaaatttggagaagctcatgctgaaatagatgcttttaaaaattgtaaagag
gatcccaaaggtggtactttatatgtaaatttagaaccttgttctcactatggaaagact
cctccttgtgtagagggcataattaaaaagggaataaaaaaagtagtaataggcatgaaa
gatcctaatcctttagttgcaggaaaaggtatagaaatattaaaaaaagctaacataaaa
gtagaagttggagttttagaagatgaatgcaggaaattaaatgaaatatttataaaatat
ataactcacaaaaaacccttttgtatattaaaatgggcatcaacgttagacggaaaaata
tgttcgcccataggagattccaaatggataacaggagaagattcaagagaatatgtgcat
ttaattagaaataaagtaagctccataatggttggagtaaatacaattataaaggacaat
ccttctttaaccacaagattaaaagatagaaaaggtgtaaattccacaagaattattgtg
gatagcaaaggaagaacaccattagatgcaaggatttttaaagaagaaggagatgctttt
atagcaactacttcacaaattcaagaaaaaaaaagaaaagaatttgaaaaaataggagcc
aaaataattattacaccagaaaaagatggaaaaattgatttacaatatcttgttaactat
ttagcagaaattaatatagacagcgtacttttagaaggtggtggaacactaaactattca
gctttaaaagaaggaattgtagataaagctcttatattcatagctccaaaaatactaggt
ggagaaaacagcaaaacacctgtagaaggagaagggacaaagtatgttaaggattgtata
aaactaaagaatttatccattaaaaattttaaagaagatattttgatagaaggctttatt
taa

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