Clostridium cochlearium: SAMEA4530647_0564
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Entry
SAMEA4530647_0564 CDS
T06756
Symbol
ribA
Name
(GenBank) riboflavin biosynthesis protein ribA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00740
Riboflavin metabolism
ccoh00790
Folate biosynthesis
ccoh01100
Metabolic pathways
ccoh01110
Biosynthesis of secondary metabolites
ccoh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
SAMEA4530647_0564 (ribA)
00790 Folate biosynthesis
SAMEA4530647_0564 (ribA)
Enzymes [BR:
ccoh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
SAMEA4530647_0564 (ribA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
SAMEA4530647_0564 (ribA)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
SNV70014
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All DBs
Position
1:556290..557489
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AA seq
399 aa
AA seq
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MFKFNSIEEAICDIKEGKMVIVVDDEDRENEGDLLMAAEKVTPEDINFMIKYGRGLVCMP
IIGERLKELNLNQMVDINTDTNGTAFTVSIDSVDTTTGISAYERAHTISKVLDSNVGGED
FKRPGHVFPLEAREGGVLKRAGHTEAAVDLARLAGFYPAGVICEIVGEDGKMARLPQLME
YSKEHNLKIINIADLIAYRRKKETLVERVVEAKMPTRWGEFKIIGYENKINGEHHVALVI
GDIENGEDVLVRMHSECLTGDALGSVRCDCGYQYEAAMKAISEEGRGVLVYMRQEGRGIG
LINKLKAYNLQDKGMDTVEANIALGFPPDLRDYGIGAQILNDLGVKKINLMTNNPKKITS
LSGYGIEIVKRVPLEIHENEESEFYLKTKKEKMGHLLHF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatttaatagtattgaagaggcaatttgtgatataaaagaaggaaaaatggtt
attgtggtagatgatgaggatagagaaaatgagggagatcttttaatggcagcagaaaag
gtaactcctgaggatattaattttatgattaaatatggaagaggattagtatgcatgcct
ataattggagaaagattaaaggaattaaatcttaaccaaatggtggatataaatacagac
actaatggaacagcttttacagtatccatagattctgtggatactactacaggtatttca
gcttatgaaagagctcataccatatcaaaagtattggacagcaatgtagggggagaggat
tttaaaagaccaggacatgttttcccattagaagcaagagaaggtggagtattaaaaaga
gcaggacatacagaagctgctgtagacctagcaagacttgcaggattttatccagcagga
gtaatttgcgagattgtaggggaagatggaaaaatggcaagacttcctcaattaatggaa
tattctaaggaacataatttaaaaattataaatatagcagatttaatagcttatagaaga
aagaaagaaaccctagtagaaagagttgtagaagctaaaatgccaacaaggtggggagaa
tttaaaataataggctatgaaaataaaataaatggtgaacaccacgtagctcttgtaata
ggagatatagaaaatggagaagatgtactagttagaatgcattcagaatgtcttacaggg
gatgctctgggttctgtaagatgtgattgtggatatcaatatgaagcagctatgaaagct
ataagtgaagaaggaagaggagttcttgtatacatgcgtcaagaaggaagaggaataggt
cttattaacaaattaaaggcttataatcttcaagataagggtatggacactgtggaagct
aatattgctttaggtttcccacctgatttaagagattatggaataggggctcaaatatta
aatgatttaggagttaaaaaaataaatcttatgacaaacaatcctaagaaaataacttca
ttatctggttatggaatagaaatagtaaaaagagttccactagaaattcacgaaaatgag
gaaagtgaattttacctaaaaactaaaaaagaaaaaatgggtcatttactacatttttaa
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