Clostridium cochlearium: SAMEA4530647_0591
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Entry
SAMEA4530647_0591 CDS
T06756
Symbol
cdaR
Name
(GenBank) carbohydrate diacid regulator
KO
K02647
carbohydrate diacid regulator
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoh03000
]
SAMEA4530647_0591 (cdaR)
Transcription factors [BR:
ccoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA4530647_0591 (cdaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
HTH_8
GGDEF_2
DUF3908
Motif
Other DBs
NCBI-ProteinID:
SNV70287
LinkDB
All DBs
Position
1:complement(585723..586781)
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AA seq
352 aa
AA seq
DB search
MKLTKELAQNISNRMMEIIPYNINIMNEKGIIIGSGDVKRLNTVHQGAIEALSQKKMIEI
NKPYKGVKPGVNTPIFWRDTPIGVIGITGTPKEVKPFSELVRVTAELLINQQYTFNQRKT
KEKLKEELLYELAYNTSKYSNSLIARSSSLGIDLSIPRIAVILNFEEIHAKNIKSVVLDF
LDKNEYSITLSGTNILLFMQYNVFLKERIQSLFKLIKFNVFIGIGLQEIILGKSVKQAFD
AIKIGKKLSFNTNIFDYKNLSFISTLSNFKGNSEYINLINKLEKQGKQTDLIKTLLVYVH
FNGELQTTAEALHIHRNTLNYRLDKIYEITNKNPKNLLDLLELYTAYIVSKL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaacaaaagagcttgctcaaaatatatccaatagaatgatggaaataatacct
tacaatataaacataatgaatgaaaaaggtattattataggcagtggtgacgtgaaaaga
ctaaatactgtacaccaaggtgccatagaagctctttcacaaaaaaaaatgattgaaata
aataaaccttacaaaggagtaaagcctggagttaacactcccatattttggagagatact
cccataggggttattggtataacaggaactcctaaagaggtaaaaccctttagtgaatta
gtaagagtaactgctgaacttcttataaaccagcagtatacttttaatcaaagaaaaaca
aaagaaaaacttaaagaagaacttttatatgaattagcttataatacttcaaagtattct
aatagcttaattgcaagaagcagttccttaggaatagacttatccattcctagaatagct
gtaatacttaatttcgaagaaattcatgctaaaaatataaaaagtgtagttttagatttt
ttagataaaaacgaatatagtataactttaagcggtacaaatatacttttattcatgcag
tataatgtttttctaaaagaaagaatacaaagtcttttcaaacttataaaattcaatgta
tttataggtatagggttacaagaaattatattaggtaaatctgttaagcaagcttttgat
gctattaaaataggtaaaaaattatcttttaacacaaatatatttgattataaaaattta
tcctttatatctactctttcaaatttcaaaggaaacagtgaatatataaatttaataaat
aaactagaaaaacaaggtaaacaaacagatttaattaaaactcttttagtttatgtacat
tttaatggggaacttcaaactacagcagaagcactccatatacacagaaacacattaaat
tatagattagataagatatatgaaattacaaataaaaatcctaaaaatttattagatctt
ttagaactctatactgcttatatagtatcaaaattataa
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