Clostridium cochlearium: SAMEA4530647_0712
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Entry
SAMEA4530647_0712 CDS
T06756
Symbol
lacI
Name
(GenBank) LacI family transcription regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoh03000
]
SAMEA4530647_0712 (lacI)
Transcription factors [BR:
ccoh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4530647_0712 (lacI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_Tnp_ISL3
HTH_7
HTH_31
Sigma54_DBD
TnsD
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
SNV71752
LinkDB
All DBs
Position
1:700140..701144
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AA seq
334 aa
AA seq
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MMPTINDVAKEAGVSISTVSRVLNNNYPVKEETRIKIEKAIEKLNYKPNMLARSLITKKT
STIGVIVPGITNLFFPTIVESIEDYSKDQGYSIVLCNTRGEALKEKEIIENLMSKGVDGI
IIIDPTIDNLKNKYLEDVSMKLPIIIINGSPEGIKGNFICYDEKVGTLEAFQYLLKLGHK
EIAFIRGSKSYSYDIKEKIYIDIIEKNNLNYKEILDVGKGNSIEVVENTQKKVEELLLKK
NKPTAIFACNDLMALGSVNACNKLNLNVPYDISIIGFDNTLISNITHPKLTTVDLNMEEI
GNIAALKLLEIIEDKNKSIKYTMETKLIVRESCY
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaactattaatgatgtagcaaaagaagcaggggtttctataagtacagtatca
agagttttaaataataattaccctgtaaaggaagagactagaataaaaatagaaaaagct
atagaaaaactaaattataagcctaatatgttagcaagaagtcttataactaaaaaaact
tctacaataggggtaattgtcccaggaattactaacttatttttcccaaccattgtagaa
agtatagaagattatagtaaagatcaaggatatagtattgtattatgtaatactagaggt
gaagctttaaaagaaaaagaaattatagaaaatttaatgtctaaaggtgtggatggaata
attattatagatccaaccatagataatttaaaaaataaatatttagaagacgtatcaatg
aaattgccaattataataataaatggatcgccagaggggattaaaggtaattttatatgt
tatgatgaaaaagttggaacattagaggcttttcaatatttattgaaattaggtcataaa
gagatagcatttataagagggtctaaaagttattcttatgatattaaagaaaaaatttat
atagacattatagaaaaaaataatttaaattataaagagatattagatgtaggaaaaggc
aatagtatagaggttgtggaaaatactcaaaaaaaagttgaagaacttcttttgaagaaa
aataaacctacagctatatttgcatgtaatgacctaatggcattaggaagtgtaaatgct
tgtaataaattaaatttaaatgtaccttatgatatttcaataattggattcgacaatact
ttgatatcaaatataactcatcctaaattaactacagtagatcttaatatggaagagata
ggaaacatagctgctttaaaattgttagagattatagaagataaaaataagtctataaag
tatactatggagactaagcttatagttagagaaagttgttattaa
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