Clostridium cochlearium: SAMEA4530647_0871
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Entry
SAMEA4530647_0871 CDS
T06756
Symbol
rarA
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SAMEA4530647_0871 (rarA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Sigma54_activ_2
AAA_5
Mg_chelatase
RCF1-5-like_lid
Sigma54_activat
AAA_22
AAA_3
AAA_14
DNA_pol3_delta2
nSTAND3
Terminase_6N
AAA_30
AAA_2
AAA_19
RNA_helicase
MCM
AAA_16
AAA_18
AAA_28
AAA_7
NB-ARC
DUF815
PhoH
ABC_tran
AAA_17
AAA_24
IstB_IS21
AAA_11
ORC-CDC6-like
Rad17
DUF5906
PIF1
Parvo_NS1
Cdc6_lid
DEAD
Torsin
TIP49
NPHP3_N
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
SNV73669
LinkDB
All DBs
Position
1:853824..855104
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AA seq
426 aa
AA seq
DB search
MIEKPLADKIRPKTLDEVFGQKHILGQEKILRRIISSEKLTNMIFYGPPGTGKTTVANII
ANKTNKTLYKLNATNASLSDIKSIIGDLDSFMGMRGVVLYLDEIQNFNKKQQQSLLEFME
KGQITLIASTTENPYHYIYKAILSRATIFEFKPLLKEDILKGLKRALDILKKEDFKNTYI
DFSKEALEYIANVSNGDLRRALNALELCAYSTKPTKENKIIVDLQVAMECTQRKVLNYDK
FGDSHYDIISAFQKSIRGSDPDASIHYLARLIEAGDLISICRRLLVIASEDIGLAYPSAI
SIVKSCVDSAMQLGLPEGRIPLAQATILLATSPKSNSCIEAIDKALMDIRNKDVGDIPSH
IRDSHYSGAESLNRGRGYKYPHNYSNNYVKQQYLPENIKDVVYYKPGKNKMEEKILNYIR
YINKEY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaaccattagcagataaaataagaccaaaaaccttagatgaggtttttggt
caaaagcatattcttggacaggaaaaaatattaagaagaataataagttctgaaaaactc
actaatatgatattttatggaccgccaggaactgggaaaaccacagtggcaaatattatt
gcaaataaaacaaataaaactttatataaattaaatgccactaatgcatcactatcagat
ataaaaagtataataggagatttagatagtttcatgggaatgcggggagtggtattatat
ttagatgaaattcagaattttaataaaaaacagcaacaatcattattagaatttatggaa
aaaggtcaaataaccttaatagctagcaccacagaaaatccatatcattacatatataaa
gctatattaagtagagctactatttttgaatttaaaccacttttaaaagaagatatatta
aagggtctaaaaagagctttagatattttaaaaaaagaggattttaaaaatacatatata
gatttttcaaaagaagcattagaatatattgctaatgttagcaatggggacttaagaaga
gcattaaatgcgttggaactttgtgcgtattctactaaacctacaaaagaaaataaaata
attgtagatttacaagtggctatggagtgtactcaaaggaaagtgttaaattatgataaa
tttggagatagtcattatgatataataagtgcctttcaaaaatccattagaggaagtgac
ccagatgcatctattcactatttagcaagacttatagaggcaggagatttaatatctatt
tgtagaagacttttggttatagctagcgaagatataggtttagcctatcccagtgcaata
tccatagtaaaaagctgtgtagattctgccatgcaattaggtttgccagaaggaagaatc
ccactagctcaggctactatacttttggcaacttctcccaaatcaaattcctgcatagaa
gctatagataaggcattaatggatataagaaataaggacgtaggagatataccaagtcat
ataagagattcacactatagtggtgctgaaagtttaaacaggggtagaggatataaatat
cctcataactattcaaataattatgtaaaacaacaataccttcctgaaaatataaaagat
gttgtttattataaaccaggtaaaaataaaatggaagaaaaaatactaaattacattaga
tatataaataaggaatattaa
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