KEGG   Clostridium cochlearium: SAMEA4530647_0926
Entry
SAMEA4530647_0926 CDS       T06756                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ccoh  Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ccoh02048]
    SAMEA4530647_0926
Enzymes [BR:ccoh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAMEA4530647_0926
Prokaryotic defense system [BR:ccoh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SAMEA4530647_0926
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD HD Paratox
Other DBs
NCBI-ProteinID: SNV74196
LinkDB
Position
1:911875..914184
AA seq 769 aa
MGNPFLAKTKNRETIIEHTDKLYKNFLDLKRIYPNVENLDWYILKLACLYHDLGKMNIKF
QNKLIKKLNAKSLEEGRDDIIEELKDNFYEIDEIPHGYLSAAFLPKQELKEKYSKDELRI
LYQSIYYHHTRDKLENHDNLMIIVKEELSNYIDEFNYDKIPKIEKLNPSFIKYVKRRIPD
ERDSNEVAKQYIVTKGLLNKIDYSASGDIAVEIENKNLFKKTYDYLKIGGFKPNKLQEYM
ITHQEDNNIIRASTGIGKTEAALFWIGNNKGFFTLPLKVSINAIYDRIVDKIKFGKENTA
LLHSETSLEYLKRNNNELDKEYINKTKQLSLPLTVCTLDQLIDFIFKYEGYELKLATLSY
SKLVIDEIQMYSPELVAYLIVALKQITEMGGKFSIVTATLPPVFTHFIKDNVKDLKIPEP
FYKEVEGKMQLRHKLNVIKEDINVEHLKKNYKDKKILVIVNTVKKAQEIYDVLQKELVEN
SLVKDNYINMLHSRFTKEDRGKKEDEILTMGKLENKQCGIWITTQVVEASLDIDFDLLYT
ELSDISGLFQRMGRVYRNRTLKDNITNIYVYVGANKFTSGIGNSDKSIIDKDIFNLSKEA
LINYVGSSDGKEINEVDKMNLVEKVYSVENLGNTEYYSKIKNVIDKMSDIKAFEYNKKDI
NLRNIENTNIIPKEVYEENKDFIQENADLINNTNKLNARIIARNNINKFVISIPTYEFKR
ANENGYIHDFVEISEKVEIPVMAYKYSNAKGLERPKENMKEFNEQNQFM
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgggaaatccttttcttgcaaaaactaaaaatagggaaacaattatagaacatactgat
aaattatataaaaattttttagatttaaagagaatttatcctaatgtagaaaatttagat
tggtacattttaaaattggcttgtttatatcatgatttagggaaaatgaacataaaattt
caaaataaattgataaaaaaattaaatgctaaaagtttagaagagggtagagatgatatt
atagaagaacttaaagataatttttatgaaatagatgaaatacctcatggatatttaagt
gctgcttttttacctaaacaagagttaaaagaaaaatatagtaaagatgaattaagaatt
ttatatcaaagtatatattatcatcatactagagataagcttgaaaaccatgacaattta
atgattatagttaaagaagaattaagtaattatatagatgaattcaattatgataaaata
cctaaaatagaaaagcttaatccatcttttataaaatatgttaaaagaagaattccagac
gaaagggattcaaatgaagttgctaaacaatacatagttactaagggattattaaataag
attgattattcagctagtggggatattgctgtagaaatagaaaataaaaatttatttaaa
aagacctatgattatttaaaaattggaggttttaaacctaataaacttcaagaatatatg
ataactcatcaggaggataataatataataagagcatctacaggtattggaaaaactgaa
gcagcattattttggataggaaataataaaggcttttttacactacctttaaaagtatct
ataaatgccatttatgatagaattgtggataaaataaaatttggaaaagaaaatactgca
ttgttacactcagaaacttctctagagtatttaaaaagaaataataatgaattagataag
gaatatataaataaaactaaacaattatcacttccgctaactgtttgtacattagaccaa
ttaatagattttatattcaaatatgaaggatatgaattaaaattagcaacactttcttat
tctaagcttgtaatagatgaaatccaaatgtattctccagagttagtagcatatttaata
gtagcgttaaagcaaataacagaaatgggaggaaagtttagtatagtaactgctacatta
cctccagtgtttacacattttataaaagataatgtaaaagatttaaaaattcctgaacct
ttttataaagaagtagaaggaaagatgcaattaagacacaaactaaacgttataaaagaa
gatataaatgtagagcatttaaagaaaaattataaagataaaaagattttggttatagta
aatacagtaaaaaaagctcaggaaatatatgatgtgttgcaaaaagaattagttgaaaac
agtttagtaaaagataattatataaacatgttacacagtagatttacaaaagaagataga
ggaaaaaaagaagacgaaatattaactatgggtaaattagaaaataaacagtgtggtata
tggattacaactcaagtagttgaagcaagcttagatatagattttgatttattatataca
gagctttccgatatatctggattatttcaaagaatgggtagggtatatagaaataggact
ttaaaagataatattacaaatatttatgtttatgttggagctaataagttcacttccgga
attggaaatagtgataaatccataatagataaagatatatttaatttatctaaagaagct
ttaataaattatgtaggaagtagtgatggaaaagaaattaatgaagtggataaaatgaat
ttagtagagaaggtctattctgttgaaaacttaggaaatactgagtattatagcaagata
aaaaatgtaatagataaaatgagtgatataaaggcttttgagtataataaaaaggatatt
aatttaaggaatatagaaaatactaatataatacctaaagaggtttatgaggaaaataaa
gattttatacaagagaatgcagatttaattaacaatactaataaattaaacgcaaggata
atagctagaaacaatataaataaatttgtgatttctatacctacgtatgaatttaaacgt
gctaatgaaaatggatatattcatgattttgttgaaataagtgaaaaggtagaaatacct
gtgatggcttataaatatagcaatgcaaaaggtcttgaaagacctaaagaaaatatgaaa
gaatttaatgaacaaaatcaatttatgtag

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