KEGG   Clostridium cochlearium: SAMEA4530647_0992
Entry
SAMEA4530647_0992 CDS       T06756                                 
Name
(GenBank) CRISPR-associated Csh1 family protein
  KO
K19114  CRISPR-associated protein Csh1
Organism
ccoh  Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ccoh02048]
    SAMEA4530647_0992
Prokaryotic defense system [BR:ccoh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-B factors
    SAMEA4530647_0992
SSDB
Motif
Pfam: Cas_TM1802_C Cas_TM1802_M Cas_TM1802 TRM10_Arch_C
Other DBs
NCBI-ProteinID: SNV74859
LinkDB
Position
1:984663..986660
AA seq 665 aa
MQEGIYQIGCAVALDSSEEDRIVQKIPTEKKGKVQHILKINFNTKDETLSIDGNEEVKKD
SHKKYLFVDKVGGPNSPQWLVTRNSLQYHVSETINSLTDLDFGQEINENIKQVLQKFFID
LGEEVDKKYRYILDFKKFNIVEEDLKEEFNKILEEENTEDKKEIKKLAKTFTNKYVKIFE
NYIKEKTSLKPNEIAIYTIFINDKALAQTKEYREVVVDKKLGGKPKKKGKTKELVCSMCN
STSSDIGDTKKLSLKFYTTNQVIFSSDLTGDYTKNMVLCEECLNNIMAGENYIKDNLNTN
IAGLSVYLIPHFIFGQPLDKNSLDNTTKWIKNSFNTVKNIKSIEKFKEHATSEKKLEDEI
EDKNSYFLLNILFYKRVNQATKIKRLIKDINPSIFDEIYKSQSKARQVYEKAIDKSLKTF
LGLESIYYLTPIRIKDGEMQQYNNLLYMYDAIFTKRTLDKKVIIKSILDAIVIKYLKKEG
YNIKAGENNEIRDMVIQSGMYLKFLEYLGCIKGSEKMDVTKLIVKDDIKNYIDNMSYNEE
ETAMFLLGYLMGEIGNCEYKRAKEGKKPILNKLNYSGIDKNKIIRLSNLVFNKLRQEKIL
TYNEIIYNQCKQLIDENLNHWKMDKSENLYYILSGYSYSSTKAILNSKKENNEEKENEGG
NVNEQ
NT seq 1998 nt   +upstreamnt  +downstreamnt
ttgcaagaaggtatatatcaaataggttgtgctgtagctttagatagcagcgaagaagac
aggatagttcaaaaaataccaacagagaaaaagggaaaagtacaacatatattaaaaata
aattttaacacaaaagatgaaactttaagcattgatggaaatgaagaggtaaaaaaggac
agtcataaaaaatatctatttgtagacaaagtagggggtcctaattctccacaatggctt
gtaacaagaaattctttacaatatcatgtatcagaaaccataaatagcttaacagattta
gactttggacaagaaataaatgaaaacataaaacaagtactacagaaattcttcatagat
ttaggagaagaagttgataaaaaatataggtatatattagattttaaaaaatttaatata
gtagaagaagatttaaaagaggaatttaataagattctagaagaagaaaatacagaagat
aaaaaagaaattaaaaaattagctaaaacctttacaaataaatatgtaaaaatattcgaa
aattatataaaagaaaaaacgtcattaaaaccaaatgaaatagctatatatacaatattt
ataaatgataaagccttagctcaaactaaagaatacagagaagttgtagttgataaaaaa
ttaggtggaaaacccaagaaaaaaggaaagactaaggaattagtgtgcagtatgtgtaat
agtacatcatcggatattggggatactaaaaaattatcactaaaattttatactactaat
caagtaatattttcaagtgaccttacaggggattatacaaaaaatatggtgctttgtgag
gaatgcctaaataacatcatggctggtgaaaattatataaaggataatttaaatacaaac
atagcaggacttagcgtatatttaatacctcatttcatatttggacaacccttagacaaa
aattccttagataacactactaaatggataaagaattcctttaatactgtaaaaaatata
aaaagcatagaaaaatttaaagaacatgctacatcagaaaagaaattagaagatgaaata
gaagataaaaattcctacttcttattaaatatattgttttacaaaagagtaaatcaagca
actaaaataaaaagacttataaaggatataaatccatctatatttgatgaaatttataaa
agtcaaagtaaggcaagacaagtttatgaaaaagcaatagataagagtttaaaaacattt
ttgggtttagaaagtatttattatttaactcctataagaatcaaagatggagaaatgcag
caatataataatcttttatatatgtatgatgctatatttacaaagagaacattggataaa
aaagttattataaaaagtatactagatgcaattgtcattaaataccttaaaaaggaaggt
tataacataaaagcaggagaaaataatgaaataagggatatggtaattcaaagtggaatg
tatttaaaatttttagagtatttaggatgtataaaggggagtgaaaaaatggatgttacc
aaattaattgtaaaggatgatattaaaaattatattgacaatatgtcctacaatgaagaa
gaaacagctatgtttcttttaggatatctaatgggggaaataggaaactgtgaatataaa
agagctaaagaaggtaaaaaacctatattaaataaattaaattatagtggtatagataaa
aataaaattataagattaagtaatttggttttcaataaattaagacaagaaaagatacta
acatataatgaaataatatataaccaatgtaaacaattgatagatgaaaacttaaatcat
tggaaaatggataaaagcgaaaatttgtattatatactttcaggatattcctattcttca
actaaagccatattaaattctaaaaaagaaaataatgaggaaaaagaaaatgaaggagga
aatgtaaatgaacaatag

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