KEGG   Clostridium cochlearium: SAMEA4530647_0995
Entry
SAMEA4530647_0995 CDS       T06756                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ccoh  Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ccoh02048]
    SAMEA4530647_0995
Enzymes [BR:ccoh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAMEA4530647_0995
Prokaryotic defense system [BR:ccoh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SAMEA4530647_0995
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C ResIII PhoH Cas3_HD
Other DBs
NCBI-ProteinID: SNV74893
LinkDB
Position
1:988401..990734
AA seq 777 aa
MKFYSHKDKLIIEHLKEVRDLSKNNIPKDLENANNITSVCHDFGKYTTYFQEYLFSKDKN
KSELSNHGFISAVFAAYVALCIYGKKTYMPYIIYNCVLHHHGSLENPSLDLPKDFSKIDE
NEDEVLLNKIDNCKKQLKDIKNNRKYIEKDYEELGFIDEFNSFLDKEPIDDTLLNIKKLD
SIFDMKNKDEKFYFIHQLLYSALISADKISASNTYMPSIKYAEYEFLNKVKEDKFKNGEL
SKINKIRGEIFYNIQNELEKNYKDEKIFSITSPTGTGKTLSGFFAALKLKDLLKDNRKII
YSLPFTSIIDQNYESIYELLESIENFSKCENEYIIKHHNLSNVEYSSENENYDKNKAELL
IENWTSGIVVTTFVQLLQTLIGNKNRMLKKFNSMRGAIILLDEIQAIDIKYLRLVDFILK
GAVKYLDCRIIMMTATKPLILKESCELLYNNEEYFKMFNRTSIMPKINPITVEEFIEEFT
NNIEEKSYLIICNTINQSLKIYDSLKNLDREVYYLSTNLLPFHRKNIINEVSYMLKKGEN
IILVSTQVVEAGVDFDFDVVIRDIGPMDSIIQAAGRCNRNGKKKNGEVYLYSMINDKEEY
FGNIIYGKSIIAISKELLENKDLIPEKEYFYIIKEYFEKVNENINTEASDEFMESIKKLY
FSYAPEEKYSINKFSLIKNNPDYIDVYFIINDEAEEVYKKFLNMLSEKDIIKRKYIYLQI
KNKLKEYTLSLPSKYHGNFTKSVVPNIPFLVLPKEGCDDLYHPKTGFKREEEDFMVF
NT seq 2334 nt   +upstreamnt  +downstreamnt
gtgaaattttattcacataaggataaattaattatagaacacttaaaagaagttagggat
ttatctaaaaataatatacctaaagacttagaaaatgccaataatataacaagtgtttgc
catgattttggaaaatatactacatattttcaagaatatttatttagtaaagataaaaat
aaaagtgaactatcaaaccatggatttatatcagcagtttttgcagcttatgtggctttg
tgtatttatggtaaaaaaacttatatgccatatataatatacaattgtgtacttcatcat
catggaagccttgaaaatccatctttagatttgccaaaagattttagtaaaatagatgaa
aatgaagatgaagttttattaaataaaatagataattgtaaaaaacaattaaaggatata
aaaaataataggaagtatatagaaaaagattatgaagagctaggatttatagatgagttt
aacagctttttagataaggaacccatagatgacacacttttaaatataaaaaaattggac
agtatatttgatatgaaaaataaagatgaaaagttttattttatacatcaattactttat
tctgccttaatatcagcagataaaataagtgcctcaaatacttatatgccttcaataaaa
tatgcagaatatgaatttttaaataaagttaaagaggataaatttaaaaatggtgaactt
agcaaaataaataaaataagaggagaaatattttataatatacaaaatgaattagaaaag
aactataaagatgaaaaaatattttctataacttcaccaacaggaacaggtaaaacccta
tcaggattttttgcagctttaaaattaaaagatttgttaaaagacaatagaaagataata
tattcccttccctttacttctataatagatcaaaactatgaaagcatatatgaactttta
gagagtatagagaatttttctaaatgtgaaaatgaatatattataaaacatcataacctt
tctaatgtggaatacagttcagagaatgaaaattatgataaaaacaaagcagaactttta
atagaaaattggactagtggcattgtagttacaacttttgttcaacttcttcaaacctta
attggaaataaaaatagaatgcttaaaaaatttaattctatgaggggagctataatttta
ttagatgaaatacaagctatagatattaaatacctaagacttgtggattttattttaaaa
ggagctgtaaaatacctagattgtagaataataatgatgactgccacaaaacctttgata
ttaaaggaaagttgtgaacttttatacaataatgaagagtattttaagatgtttaataga
acaagtattatgcctaaaattaatcctattactgtagaagaatttatagaggaatttaca
aataatattgaagaaaaatcctatcttataatatgcaatacaataaatcaatcactaaaa
atatatgattctctaaagaatttagatagagaagtttattatttatctacaaatttactg
ccatttcatagaaaaaatataattaatgaagtaagttatatgttaaaaaaaggtgaaaac
ataatattagtgtcaactcaagtagtagaggctggagtggattttgattttgatgtggta
ataagagatataggacctatggattctataattcaagcagcgggaagatgtaatagaaat
ggtaagaaaaagaatggggaagtctacttatactctatgataaatgataaagaagagtat
tttggaaacataatatatggaaaatccataatagctatatcaaaagagttactagaaaat
aaagacttaataccagaaaaagaatatttttatatcataaaagagtattttgaaaaggta
aatgaaaatataaatacagaagcatcagatgagtttatggagtccattaaaaagctatac
ttttcttatgcaccagaggaaaaatatagtataaataaattttctttaattaaaaacaat
ccagattatatagatgtatattttattataaatgatgaagcagaagaggtttataaaaag
tttttaaatatgctttcagaaaaggacataattaagagaaaatatatatacctgcaaata
aaaaataaactaaaagaatatacattgtctttaccatctaaatatcatggaaattttacg
aagtctgtagtgccaaatattcccttcttagtacttcccaaagaaggttgtgatgattta
tatcatcctaaaacaggattcaaaagagaagaggaagattttatggtattttaa

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