Clostridium cochlearium: SAMEA4530647_1061
Help
Entry
SAMEA4530647_1061 CDS
T06756
Symbol
smc
Name
(GenBank) chromosome segregation protein smc2
KO
K03529
chromosome segregation protein
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccoh03036
]
SAMEA4530647_1061 (smc)
Chromosome and associated proteins [BR:
ccoh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SAMEA4530647_1061 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Fez1
Occludin_ELL
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SNV75543
LinkDB
All DBs
Position
1:1048700..1052260
Genome browser
AA seq
1186 aa
AA seq
DB search
MFLKSLEIRGFKSFANKTEINFQKGITAIVGPNGSGKSNISDAIRWVLGEQSIKSLRGGK
MEDVIFAGTQFRKPVGLAKVSLTLDNSKSELPLDYSDIMISRIIYRSGESEYLINNTKCR
LKDIQELFMDTGIGKEGYSIIGQGKIDAILSGKPEERRGLLEEAAGIVKFKKRKEEAERK
LEKTEENIIRIQDITSTYMERLEPLEKESKKAKEFLSLSNDLKEKEINIILYSIEELNNK
VNQINEKIKEIQNEIESLELKKNNYKDNIKNLSLEIDKLEGRIEDNKKGYYNKKEEYSNL
KNELHILKERINNLNDFIENISNEIKNNNLKLEEMCKLKKIAEDKFSNNKRILEELLLDF
TKKEEHIKKLNEEFKNKDLELKKCKEDHIQYLSEISNLRNKMNLVDNNIKAIKDKLMNLK
ENYESYMNSIKINITTVEALKENVNARNIKKEKHENEIKENKKEIAKINSSLTRRNRELK
DLNINFNKLMGNYQFLNNLEKEYEGYNKSVKNLMKAIQKGHIQNALNNSFVVGEVIDVKK
EYEVCMEIALGGAISNIITKDENVAKELINYLKANKLGRATFLPLNIIKGNSIELSNDIK
STPGYIGIACDLINYREEFSQIIKHILGRTIICEDMDKALNIAKKLRYKYKIVTLAGEII
NAGGALTGGSVYQGKNSNVIGRKREIKEIKNKIKEIENKIKLEMDLIQKDQNKLTVLEES
CLNLKDEIYFEDIEITKLTEKLHSIENENIKLKEKIIILKKEKENLNKQLEEYKNEEENS
KYELTVFEGKQNHNKNKINVLENQLADKEENLNKLKEQLTLKRIEKAQIEEIISNDLKEV
ERVNKELENLKNKSKEDDERLKTSKVKLQNYIKDLNLKKNLTEKLEKDLSLIEENFKEEE
IQLLNLKEEKNKIQGEEENIIDIKGKKEEVFHKYDISKTKLQTQKESLYNKIMEYDINSY
EDALKYKKPIDNLNEYRNCIKDIKLEINKLGTVNVGAIQEYEDTKEKYDFMTSQKEDLIN
AKAEIIELIDEMTSKMKIIFKENFQKLRKNFDETFKELFKGGNADLILSSDDELNGDIDI
TVQPPGKKLQNINLMSGGEKVLSAIALLFAILKMKPTPFCILDEIEAALDDANVARYAEF
LKAFSNNIQFIIITHRKGSMEVSDALYGITMEEKGVSKVVSLDFKD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaatcacttgaaataagaggttttaaatcttttgctaataagacagagata
aattttcaaaagggtattactgctatagttggaccaaatggtagtggtaaaagcaatata
tctgatgcaataagatgggtattaggagaacagagtataaaaagtttaaggggagggaaa
atggaagatgtaatttttgcaggaactcaatttagaaaaccagtaggacttgcaaaggtt
tccctaactttagacaatagtaaatctgagttgcccttagattattcagatataatgatt
tcaagaattatttatagatctggagaaagtgaatatttgataaataatactaagtgtagg
ctaaaagacattcaggaattatttatggatacaggtataggaaaagaagggtattctata
atagggcaaggtaaaatagatgctatattaagtggaaaaccagaagaaagaagaggtctt
ctagaagaagcagcaggtatagtaaaatttaaaaaaagaaaagaagaagcagaaagaaaa
cttgaaaaaacagaggaaaatattataagaatacaggatataacctcaacttatatggaa
agactagaacctttagaaaaagaaagtaaaaaagctaaagaatttttaagcctaagcaat
gatttaaaagaaaaagaaataaatataattttatattccatagaagaattaaataataaa
gttaaccaaataaatgaaaagataaaagaaatacaaaatgaaatagaaagtttagaacta
aaaaagaataattataaagataatataaagaatttatccttagaaatagataaattagaa
ggaagaatagaggacaataaaaaaggatattataataaaaaagaagaatattccaatttg
aaaaacgaattacatatactaaaagaaagaataaataatttaaatgactttatagaaaat
atatctaatgaaataaagaacaataacttaaagttagaagaaatgtgcaaattaaaaaaa
atagctgaagataaattttctaataataaaagaattttggaagaattattattagatttt
acaaaaaaagaagagcatataaaaaagttaaatgaggaatttaaaaataaggatttagag
ttaaaaaagtgtaaagaggatcatatacaatatttaagtgaaatatccaatttaagaaat
aagatgaatttagttgataacaatataaaagctataaaggataaattaatgaatcttaaa
gaaaattatgaaagctatatgaactccataaaaataaatattacgactgtagaagcttta
aaggaaaatgtaaatgcaaggaatataaaaaaagaaaaacatgaaaatgaaataaaagaa
aataaaaaagaaatagctaaaataaattccagtttaactagaagaaatagagaattaaaa
gatttaaatataaactttaataaattaatgggcaattatcagtttttaaataatctagaa
aaagaatatgaagggtataataagtctgttaaaaatctaatgaaagccatacaaaagggg
catattcaaaatgctttgaataattcttttgtagttggagaagttatagatgtaaaaaaa
gaatatgaagtgtgtatggaaatagctttaggaggagctatttcaaatataataactaag
gatgaaaacgtagcaaaagaacttataaattatttaaaagcaaataaactaggaagagct
acatttttacctttaaacattattaagggaaattctatagaattatcaaatgatataaaa
agtactccaggttacataggaattgcttgtgatctcattaattatagggaagaattttct
caaattataaaacacattttgggaagaactataatatgtgaagatatggacaaagcttta
aatatagcaaaaaagttaagatataaatataaaatagttacccttgcaggagaaattata
aatgcagggggagccttaacaggaggaagtgtatatcaagggaaaaactctaatgttata
ggtagaaaaagagaaataaaagaaataaaaaataaaataaaggaaatagaaaataaaata
aaattagaaatggatttaattcaaaaggatcaaaataaattaactgttctagaagaaagt
tgtttaaatttaaaggatgaaatatattttgaggatatagaaataactaaactaactgaa
aaattacatagcatagaaaatgaaaatataaaattaaaagaaaaaataattatattaaaa
aaagaaaaagaaaatctaaataaacaattagaagagtataaaaatgaagaagaaaatagt
aaatatgagttaactgtttttgaaggaaagcaaaatcataataaaaataaaataaatgta
ttagaaaatcagttagctgataaagaggaaaatctgaataaattaaaagaacaactaact
ttaaaaagaatagaaaaagcccaaatagaagaaattatatcaaatgatttaaaagaagta
gaaagagtaaataaggaactagagaatttaaaaaataaatctaaagaagatgatgaaaga
cttaaaacttctaaagttaaattacaaaattacataaaagatttaaatttaaagaaaaat
ttaactgaaaaactagaaaaagatttaagcttaatagaggagaattttaaagaagaagaa
atacagctattaaatcttaaagaagaaaaaaataagatacaaggtgaagaggaaaacata
attgatataaagggtaaaaaggaagaagtttttcataagtatgatataagtaaaacaaaa
cttcaaactcaaaaagaaagtttatataataagattatggagtacgatataaattcatat
gaagatgctttaaaatataaaaagcctatagacaatttaaatgaatatagaaattgtata
aaagatataaaattagagataaataaattgggaacagtaaatgttggagctatacaagaa
tatgaagatactaaagaaaaatatgattttatgacatctcaaaaagaggatcttattaat
gcaaaagctgagataattgaattaatagatgaaatgactagtaaaatgaaaattatattc
aaagaaaattttcaaaagttaagaaaaaactttgatgaaacttttaaggagttattcaaa
ggaggcaatgcagacttaattttaagttctgatgatgaattgaatggagatattgatatt
acagttcaaccaccaggtaaaaaacttcaaaatataaatcttatgtctggtggagaaaag
gtattgtcagctatagctttgttatttgctatattaaagatgaaacctacaccattttgc
atattggatgaaatagaagcggctctagacgatgctaacgtagcaagatatgcagaattt
ttaaaggcattttcaaataatatacaatttataataataacccatagaaaaggtagtatg
gaagttagtgatgctttgtatggtataaccatggaagaaaaaggagtatcaaaagttgtt
tctttagattttaaagactga
DBGET
integrated database retrieval system
