Clostridium cochlearium: SAMEA4530647_1125
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Entry
SAMEA4530647_1125 CDS
T06756
Symbol
mutS_1
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4530647_1125 (mutS_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_1125 (mutS_1)
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SAMEA4530647_1125 (mutS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND3
AAA_27
AAA_14
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SNV76164
LinkDB
All DBs
Position
1:complement(1115030..1117675)
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AA seq
881 aa
AA seq
DB search
MKLTPMMQQYLEVKERCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAP
MCGIPYHSASSYINRLVSKGYKIAICEQLEDPSLAKGIVKRDIVKIVTPGTYSDSNFLNE
TKNNYIMSLYTENDSMAMCFCDISTGDFFATDHCLDESVILDEISKFDPSELLVNEDISN
NILKEIENRFSISITNLEKDCFQDNNLLEEQFSNFNKKEYSSVLIKCGNGLLKYIFETQK
MSLGHINFFKHYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDKCSTAMGARLLR
NWIEQPLINKEKIDKRLNAVEELVLNISLHQDLKDVLRDIYDIQRIVGKISSKNVNAKEL
LSLKNSIEKLPYVKNILSKLESDLFKDMFLNLDELRDIYDLLEKSIMDNPSITIKDGNLI
KNGFNNDIDELRMAKSHGKEWIANLENSEREFTGIKSLKVGYNKVFGYFIEVTKSNLSSV
PEGRYIRKQTLSNSERYITPELKEMEDKILGAEEKLINLEYEVFVSIRNSIEKEIDRMKS
SANIVAILDCLSSLATVALENNYSKPKIVEGDSIIIKDGRHPVVEKMIPTGSFVANDTTM
DTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAREASISLCDKIFTRIGASDD
LSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVIEYICNNKKLR
SKTLFATHYHELIQLENKIKGVKNYSVSVKEVDKDIVFLRKIIKGGADQSYGIEVAKLAG
LPEDVIMRAKGILESIEKNKDNKIEINDIKESKKTVKEETKKEIAMDQLLEHNDFQISFT
QIEKENLIKEISSIDILNLNPMEGFNKLYDLINKAKSIEKK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacttacaccaatgatgcaacaatacttagaggtaaaagaacgatgtaaagactgt
atattattttttagattaggtgacttttatgaaatgttttttgaagatgctgaaactgca
tctaaagaattagaattagtattaacaggacgagactgtggtctttctaaaagggctcct
atgtgtggtataccatatcattcagcttctagctatataaatagattagtatctaaagga
tacaaaatagctatatgcgaacagttagaagacccatccttagctaaaggaatagttaaa
agagatattgtaaagatagttacacctggtacttattcagatagtaattttttaaatgaa
actaaaaataactatataatgagtctgtatacagaaaatgattccatggctatgtgcttt
tgtgatatatccactggggacttttttgccacagatcattgtttagatgaatccgttata
ttagatgaaatttcaaaatttgaccctagtgaattattagtaaatgaggatatatccaat
aatattttaaaagaaatagagaaccgttttagtatatctattactaatttagaaaaggat
tgttttcaggataataacctattagaagaacaattttctaattttaataaaaaagaatat
tcctcagttttaataaagtgtggtaatggacttttaaaatacatatttgaaactcagaaa
atgtcccttggacatataaacttttttaaacattacaatatagtagattatttatctatg
gatataaactctagaagaaatttagaaattacagaaactattagggataaatctagaaaa
ggatctcttttgtgggtattagataaatgtagtaccgctatgggagcaaggcttttaaga
aattggatagaacaacccttgataaataaagaaaaaattgataaaaggctaaatgccgta
gaagaattggtattaaatatatcattacaccaggacttaaaagatgttttaagggatatt
tacgatatacaaagaatagttggtaaaatctcttctaaaaatgtaaatgcaaaagaactc
ctttcattaaaaaattctatagaaaaattaccttatgtaaaaaatatactgtccaaatta
gaatcagatttatttaaagatatgtttttaaatttagatgagttaagggatatttatgat
ctattagaaaaatctataatggataatccatctattacaataaaggatggtaatcttata
aaaaatggttttaataacgacatagatgaacttagaatggcaaaatctcatggtaaagag
tggattgcaaatcttgaaaatagcgaaagggaatttactggaataaaatctcttaaagtt
ggatataataaagtcttcggatattttatcgaagttacaaaatccaatttatcctctgta
cctgagggaagatatataagaaaacaaacattatcaaattctgaaagatatataactcct
gaattaaaagaaatggaagataagattttaggagcggaagaaaaattaattaatcttgaa
tatgaagtgtttgtaagtataagaaattctatagaaaaagaaatagacagaatgaagtct
tctgcaaatatagtggctattttagattgtttaagttccttagctacagtggccttagaa
aataattattcaaagcccaaaatagtagaaggggatagcataatcattaaagatggaaga
catccagtagtagaaaaaatgattcctacgggtagctttgtagccaatgatacaactatg
gatactgaagataatcaaatgctattaattacagggcctaacatggcaggaaagtctaca
tatatgagacaagtagctttaattactataatggctcaaataggtagttttgttcctgca
agggaagcttccatatccctttgtgataaaatatttacaagaataggggcctccgatgac
ctatctgcaggtaaaagtacctttatggtagaaatgtgggaagtttctaatatacttaaa
aatgctacatctaaaagcttaattattttagatgaagtgggtaggggaactagcactttt
gatggattaagtatagcttgggctgttatcgagtatatttgtaataataaaaaattaaga
tcaaaaactctttttgctacccattatcatgaattaattcaattagaaaataaaatcaag
ggagtaaaaaattactctgtatcagtaaaagaagtagataaagatattgtatttttaaga
aagattataaaaggcggagcagatcaatcctatggtatagaagttgcaaaacttgctgga
cttccagaggatgtaataatgagagccaaaggaattcttgaaagtatagaaaaaaataag
gataataaaatagaaattaatgatataaaagagagtaaaaaaactgttaaagaagaaact
aaaaaagaaatagcaatggatcaattattagaacacaatgattttcaaattagctttact
caaattgaaaaagaaaacttaattaaagaaatttcttcaattgatatattaaatttaaat
cctatggaaggatttaataagctatatgatttaattaataaagctaagtctattgaaaaa
aagtag
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