Clostridium cochlearium: SAMEA4530647_1126
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Entry
SAMEA4530647_1126 CDS
T06756
Symbol
miaB_1
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_1126 (miaB_1)
Enzymes [BR:
ccoh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SAMEA4530647_1126 (miaB_1)
Transfer RNA biogenesis [BR:
ccoh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SAMEA4530647_1126 (miaB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Lipase_GDSL
Motif
Other DBs
NCBI-ProteinID:
SNV76171
LinkDB
All DBs
Position
1:complement(1117741..1119066)
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AA seq
441 aa
AA seq
DB search
MNKKGEFYIETWGCQMNEEDSEKLSGMLKNMGYENTEDRNKADIIIFNTCCVRENAELKV
YGNLGILKGLKAKNPDLIIAVCGCMMQQEGMAEDIIKKYPFVDIIFGTHNSYKFPEYLNR
TKQEGKSIIEVWDKEEEIVEGIPVDRKSSTKAFVTIMYGCNNFCTYCIVPYVRGRERSRE
VSDIVKEIKELVKSGYKEITLLGQNVNSYGKDLDPKVSFAELLRIVNDIEGIERVRFMTS
HPKDLTEDVIYAIKECDKLCNHIHLPVQSGSSRILKKMNRSYSREDYLKLVNKIKEEIPN
VAITTDIIVGFPGETEEDFNETLELVKEVEYDSAFTFLYSKRKGTPAYDMDEQVPEDVKH
ERFEKLVKIVNESCEKNNKKYQDKIVKVLVEGESKNDKNRLTGRTDTGKLVNFTGNKDNI
GKIVDVKITKTLSFSLDGEEV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaggtgaattttatatagaaacttggggttgtcagatgaatgaagaggac
tccgaaaaactatctggtatgttaaaaaatatgggatatgaaaatacagaggatagaaat
aaagcggatattataatatttaatacttgttgtgtaagagaaaatgcagaacttaaagta
tacggtaatttaggcatattaaaaggattaaaagcaaaaaatcctgatcttataattgct
gtttgcggttgtatgatgcagcaagagggtatggctgaagatataataaaaaaatatcct
tttgtagatataatatttggaacccacaactcatataaattcccagagtacttaaataga
acaaaacaagagggaaaatctataattgaagtatgggataaagaagaagaaatagtagaa
ggaattcctgtagatagaaagagttctactaaagcctttgtaactataatgtatggatgc
aacaatttttgtacatattgtatagttccatatgtaaggggtagagaaagaagtagagaa
gtttctgatatagtaaaagaaataaaagagcttgtaaaaagtggctataaggaaataacc
ttattaggtcaaaatgtaaattcctatggaaaagatttagatcctaaggtaagttttgca
gaacttttaaggattgttaatgacatagaaggtattgaacgagttagatttatgacttct
catccaaaggatttaacagaggatgtaatttatgccattaaagaatgtgataaattatgc
aatcatatacacctaccagttcaatctggctctagtaggattttaaagaaaatgaataga
tcctacagcagagaagactatttaaaactagttaataaaataaaagaagaaatacctaac
gtggcaattacaacagatattattgtaggatttcctggtgaaacagaagaagattttaat
gaaactttagaacttgtaaaagaagtagaatatgattccgcttttacattcttatattca
aaaagaaaaggaacccctgcatacgatatggatgagcaagttcctgaagatgtaaaacat
gaaagatttgaaaaactggttaaaatagttaatgaaagttgtgaaaagaataataaaaaa
tatcaagataaaatagttaaggtgctagtagaaggcgaaagtaaaaacgataaaaataga
ttaactggtagaacagatacaggaaaacttgtaaactttactggaaacaaagataatata
ggtaagatagttgatgttaaaataactaaaactctatcattttcccttgatggagaagaa
gtataa
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