KEGG   Clostridium cochlearium: SAMEA4530647_1139
Entry
SAMEA4530647_1139 CDS       T06756                                 
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ccoh  Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccoh03009]
    SAMEA4530647_1139 (rluB)
Enzymes [BR:ccoh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     SAMEA4530647_1139 (rluB)
Ribosome biogenesis [BR:ccoh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SAMEA4530647_1139 (rluB)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 SYY_C-terminal NIF
Other DBs
NCBI-ProteinID: SNV76260
LinkDB
Position
1:complement(1130997..1131701)
AA seq 234 aa
MERLQKYMASCGVDSRRKCEDIILQGRVKINGDLVKELGIKVNPEKDIVTVDNKIIKKEE
NKKYIALNKPTGYISSVKDDRGRKTILDLVDVKERIYPIGRLDYDTSGLILLTNDGDFYN
KVIHPSQEKEKVYVATIKGIPTSHELHNFKKGLVIDDYLTSPSKIEILSIQNGNAKVKIS
IIEGRNRQVRKMCEKINHPVIKLKRISIAHIELGDLPIGNWRYLTQAEIDKFNN
NT seq 705 nt   +upstreamnt  +downstreamnt
ttggaaagacttcaaaagtatatggctagctgtggtgtagattcaagaaggaaatgtgaa
gatataatattacaaggaagggtaaaaataaatggagatttagtaaaggaactaggcatt
aaagtaaatcctgaaaaagatattgttactgttgataataaaataataaaaaaagaagaa
aataaaaaatatatagctttaaataaacccactggatatatttcctcagtaaaagatgac
aggggacgtaaaaccatattagatcttgtagatgtaaaagagagaatatatccaataggt
agattagactatgatacttcaggattaatattgcttacaaatgatggtgatttttataat
aaagttatacatcccagccaagaaaaagaaaaggtctatgttgcaactattaaaggaatt
cccaccagccatgaattacataattttaaaaaaggtctagtaattgatgattatctaact
tcaccatcaaaaatagaaattctttcaatacaaaatggcaatgcaaaagttaaaatatcc
ataatagaaggaagaaatagacaagtaagaaagatgtgtgaaaaaataaatcacccagta
ataaaattaaaaagaatttccatagcacatatagaattaggagatttgcctataggaaat
tggagatatctcactcaggctgaaatagataaatttaataattaa

DBGET integrated database retrieval system