Clostridium cochlearium: SAMEA4530647_1277
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Entry
SAMEA4530647_1277 CDS
T06756
Name
(GenBank) extracellular substrate-binding protein
KO
K01989
putative tryptophan/tyrosine transport system substrate-binding protein
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_1277
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative tryptophan/tyrosine transporter
SAMEA4530647_1277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_sub_bind
Peripla_BP_4
Peripla_BP_6
DUF4898
DUF7006
DUF2325
Motif
Other DBs
NCBI-ProteinID:
SNV78645
LinkDB
All DBs
Position
1:complement(1255773..1256786)
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AA seq
337 aa
AA seq
DB search
MVAKKKISILTAVLLTLSIFGGCGKPQDTKEKALGDKEVIKIGITQIIEHPALDKSREGF
IDALKSKGFEDGKNIKIDYQNAQGDMPTTQSIAKDFVSKKEDIIFAVATPSAQAAFNATK
EIPILITAVTDPVDAGLVKSIEKPGTNVTGTSDIVPIEAQLKLLKKIMPKAKKVGILFNT
SENNSQIQVKNIKNAASKFNLEVIEASITNVNEVPQALNSLLEKVDVLYTPTDNTVASAM
TMISNECFKKNIPIIGAERAHVTGGALATIGIDYYKLGFQTGLLAVDIINGKKPSEMPIE
TLEQMQLVINEDSVKKLNLNIPKELIEKAEMVKKGDK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaaagaaaaaaatttcaattcttacagcagttcttttaacattatcaattttt
ggaggttgtggtaaaccacaggacaccaaagaaaaagctcttggtgataaagaggtaata
aaaatagggattactcaaataatagagcatccagcccttgataaatccagagaaggcttt
attgatgcattaaaatctaaaggttttgaagatggtaaaaacattaaaatagattatcaa
aatgcacaaggagatatgcctacaactcaatcaatagccaaagattttgtttctaaaaag
gaagatattatatttgcagtggcaacaccttctgctcaagcggcttttaacgcaactaaa
gaaattccaattcttataacagcggttacagacccagtagatgcagggcttgttaaatca
atagaaaaaccaggaaccaatgttacaggaacatcagatattgttcccatagaagctcaa
ctaaagttattaaaaaaaataatgccaaaggcaaaaaaagttggtattttatttaataca
agtgaaaataattcacaaatacaagttaaaaatattaaaaatgctgcttcaaaatttaat
ttagaagttattgaggcgtcaataacaaatgtaaatgaagtacctcaagctttaaattca
cttttagagaaagttgatgttttgtatacacctacagataatacagtggcttcagctatg
acaatgatttctaatgaatgttttaagaaaaatataccaataataggtgcagaaagagct
catgtaacgggaggagcacttgcaactataggtattgactactataaattaggatttcaa
acaggacttttagcagtagacattattaatgggaaaaaacctagtgaaatgcctatagaa
accttagaacaaatgcaactagttattaatgaagattctgttaaaaaacttaatttgaat
atacctaaagaattaatagaaaaagcagagatggttaagaaaggagataaataa
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