Clostridium cochlearium: SAMEA4530647_1375
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Entry
SAMEA4530647_1375 CDS
T06756
Symbol
pilC
Name
(GenBank) general secretion pathway protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccoh02044
]
SAMEA4530647_1375 (pilC)
02035 Bacterial motility proteins [BR:
ccoh02035
]
SAMEA4530647_1375 (pilC)
Secretion system [BR:
ccoh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SAMEA4530647_1375 (pilC)
Bacterial motility proteins [BR:
ccoh02035
]
Pilus system
Pilus assembly proteins
SAMEA4530647_1375 (pilC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Stonustoxin_helical
DnaB
SP24
Motif
Other DBs
NCBI-ProteinID:
SNV80008
LinkDB
All DBs
Position
1:complement(1344266..1345465)
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AA seq
399 aa
AA seq
DB search
MFFYKAKNLKGKYINGIYRGKELKKLRKELREKNFYLIYKKDIHVLEPLENNRLNLKERW
LFCKQLKLLIASGIKVTEALGITKDFFKRKSIKNSIEEIRKKVYLGESISEAMMEFKDIY
PNFLINMIKIGEDNGNLTEVLDKLELYYENQWDISNKIKEIIIYPMFLVVFSIIMCMFLS
GFILPQFESILREFNETVPAFTKFIFNLFTFLKGNKIIILFCLTTSATIFLHKVKKNSVN
IKYGILRRTPFLKDIYYKLQMYKILMCLWMSLKCGLNIDKALEETCLIVEDNKIVKDLNK
IKFKITQGTSIFEAFQQCLSNLMSQDIIILIKTGEESGNLENILKDICNMTKREIIIKIN
SMVKLIEPVIIILISIHIGIVIIALFLPILGIMDGITNI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttataaagccaaaaatttaaagggaaaatatattaatggaatatacagagga
aaagaacttaaaaaattaagaaaagaattaagagaaaaaaacttttatttaatatataaa
aaagatatacacgtattagagcctctggaaaataacagattaaatctaaaagaaagatgg
ttattttgcaagcagttgaaattacttatagcatcaggtataaaagtaacagaagcactg
ggaataactaaagatttctttaagagaaaaagcataaaaaacagcatagaagaaataagg
aaaaaagtttatttaggagaaagtataagtgaagctatgatggaatttaaagatatatat
ccaaacttccttataaatatgataaagattggagaagataatggaaatttaacagaagtt
ttagacaaattagagctatattatgaaaatcaatgggatataagtaataaaataaaagaa
ataattatttatccaatgtttttagttgtattttctataattatgtgtatgtttttatct
ggatttatattgccgcaatttgagagtatattaagagaatttaatgagacagtaccagct
tttactaaatttatttttaacttatttacatttttaaaaggaaataaaattataatatta
ttttgtttaactactagtgcaaccatatttttacataaggtaaagaagaattctgtaaat
ataaaatatggcatactaagaagaactccatttttgaaagacatatattacaaattacaa
atgtataaaattttaatgtgcttatggatgagcttaaagtgcggattaaatatagataag
gctctagaagaaacttgtttaatcgtagaagacaataaaattgtaaaagatttaaataaa
attaaatttaaaataacacaaggaacatctatttttgaagctttccagcaatgtttaagt
aatttaatgagccaggacataattattttgataaaaaccggagaggaaagtggaaattta
gaaaatatattaaaagacatatgtaatatgacaaaaagagaaattattataaagataaat
tctatggtgaaattaatagagcctgtaattattatcttaatttctatacatataggtatt
gtaataatagcattatttttacctatattaggaattatggatggaataacaaatatatga
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