Clostridium cochlearium: SAMEA4530647_1376
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Entry
SAMEA4530647_1376 CDS
T06756
Symbol
epsE
Name
(GenBank) general secretion pathway protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccoh02044
]
SAMEA4530647_1376 (epsE)
02035 Bacterial motility proteins [BR:
ccoh02035
]
SAMEA4530647_1376 (epsE)
Secretion system [BR:
ccoh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SAMEA4530647_1376 (epsE)
Bacterial motility proteins [BR:
ccoh02035
]
Pilus system
Pilus assembly proteins
SAMEA4530647_1376 (epsE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_22
AAA
AAA_14
nSTAND3
ResIII
Zeta_toxin
AAA_19
ATPase_2
MshEN
AAA_16
AAA_7
ABC_tran
cobW
AAA_30
AAA_29
NTPase_1
AAA_11
AAA_23
NPHP3_N
DEAD
TrwB_AAD_bind
DUF87
Lar_restr_allev
SRP54
AAA_18
SLFN-g3_helicase
ATP_bind_1
Sigma54_activat
NB-ARC
Herpes_TK
RNA_helicase
NTPase_P4
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-ProteinID:
SNV80025
LinkDB
All DBs
Position
1:complement(1345480..1346928)
Genome browser
AA seq
482 aa
AA seq
DB search
MSEIKYNFIVNQEAVDKIPLNISEKYFIFPYDIDNEFIYIMCSKKLLTYEEEEIKFISGR
ELKTYIEDSNYIKHCINKFYYKKEAMYITKILKENKNEYIQNADKSLKDEDSPGVKMLNY
FLKEAISKRASDIHIEPFEDKAVVRFRIDGALHEFWNLSQQLYRQIKGRVKILSNMDIAE
KKYPQDGKFKFNFYKKDIDIRVSTMPTLYDEKLVLRILYKSQELIKLKDLGFYGEAFYEI
KKISKYSSGMILVTGPTGSGKTTTLYSIINEMDKKHRNIITIEEPVEYSMYGVNQINIRE
KIGMTFSNVLKYVLRQDPDVIMIGEIRDKDTAQMAIRASLTGHLVLASLHTKDPLSSIIR
LMDMEVPDYLLMESLNAIISQRLVRKLCPFCREKFFYKAMSSEIYKKVGCEKCNYTGYLG
RVLIYERVILDKYIKEMILKGCSMDRIRKYTLEKNKTNLEESALDLVRKGKTSIEELEKL
NF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaaatataattttattgtaaatcaagaagctgttgataaaataccactt
aatatttcagaaaagtactttatttttccatatgatatagacaatgaatttatttatatc
atgtgtagtaaaaaacttttaacctatgaagaggaagaaataaaattcatatctggaagg
gaattaaaaacatatatagaggattcaaattatataaaacattgtataaataagttttat
tataaaaaagaagcaatgtatataaccaagatattaaaggagaacaaaaatgaatatatt
caaaacgctgataaatcgttgaaagatgaagattccccaggagttaaaatgttaaattat
tttctaaaagaagccatatctaagagagctagtgatatacacatagaaccctttgaagac
aaagctgtagttagatttagaatagatggggcgttgcatgaattttggaacttatcacaa
caattatataggcaaataaaaggaagggttaaaatactttctaatatggacatagcagag
aaaaaatatcctcaagatgggaaatttaaatttaatttttataaaaaagatatagatata
agggtatctactatgcccacattatatgatgaaaaactagtgttaagaatactatataaa
tctcaggaattaataaaattaaaggatttagggttttatggagaagctttttatgaaatt
aagaaaatatctaagtactctagcggcatgattttggttacaggacctacaggaagtggt
aaaaccactacattgtactccataataaatgagatggataagaaacacagaaatattata
accatagaagaacctgttgagtacagtatgtatggagtaaatcaaattaatataagagaa
aaaataggtatgacttttagcaatgtactaaaatatgtcctaaggcaggatcccgatgta
ataatgattggagaaataagagataaggatacggctcaaatggccataagagcctcttta
acaggccatttagtattggcatctttacatacaaaagatccattgtcttccattataagg
ctaatggatatggaagtgccagattatcttctaatggagtcgctaaatgcaataatatct
caaagacttgtaagaaaattatgtcctttttgtagggaaaagtttttctataaggctatg
agtagtgaaatttacaaaaaggttggatgtgaaaaatgcaattatacaggatatttagga
agagtattaatttatgaaagagttattttagataaatacataaaggaaatgattctaaaa
ggttgtagtatggataggattagaaaatataccttagaaaagaataaaactaatttggaa
gaaagtgctttggatttagtaagaaaagggaaaacttctatagaagaattagaaaagctt
aacttctaa
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