Clostridium cochlearium: SAMEA4530647_1401
Help
Entry
SAMEA4530647_1401 CDS
T06756
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00300
Lysine biosynthesis
ccoh00550
Peptidoglycan biosynthesis
ccoh01100
Metabolic pathways
ccoh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMEA4530647_1401 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA4530647_1401 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA4530647_1401 (murF)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SAMEA4530647_1401 (murF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
SNV80355
LinkDB
All DBs
Position
1:complement(1366499..1367884)
Genome browser
AA seq
461 aa
AA seq
DB search
MEYLSLEDIVKAVSGEVLIKGNKFDWQYVSTDTRKIEEKAIFIALKGERFNGNEYVATAS
QKGAYICIVDEEHFKKEEIKDYTTIIKVENTGKALLDLAKYYKSKLKIKVVAITGSTGKT
STKDLTAAVLSSKYKVFKTQGNFNNEIGLPLMIFKLDKSYDIAVLEMGMSDFGEIHRMAE
TALPDVAIITNIGISHIENLKSRENILKAKLEITDFFGDNNILIVNGEDELLGNLQEENY
KLIKTGLEKNHNIYAYDINLNEKKVSFEVLESESNKKVYINVPVPGKHNVLNSLLAIACG
RVLGIEFEDIKKGILNLETTSMRLDIVKGKKFNIVDDSYNASPDSMRAAIDVLCNIKGKK
RYAVLGTMKELGEESHRAHREIGKYAGEKSINLIVLGDFSKSYIEGYLEGSENNSNRGYI
LEAKDKDEVITYLNDHLDSEDVVLFKASRSEHFEEMVESFK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagtatttatcactagaagatattgtaaaagctgtatcaggagaggttttaataaag
ggaaataaatttgattggcaatatgtatcaacagatactagaaaaatagaagaaaaagct
atattcatagcacttaaaggagaaagatttaatggtaatgaatatgtggctacagctagc
caaaagggagcctatatttgtatagtagatgaagagcattttaaaaaggaagaaataaaa
gattatacaactattataaaagttgaaaatacaggtaaagccttattggatttggctaaa
tattataaaagtaaactcaagattaaagtagttgcaataactggttccactggaaagact
tctactaaagatttaacagcagcagttttaagttccaaatataaagtctttaaaactcaa
ggaaattttaacaatgaaatagggcttccacttatgatattcaaattagataaaagttat
gacatagcagtactagaaatgggcatgagtgattttggagaaatacataggatggcagaa
actgccctgccagatgtagctataataactaatataggtatatctcatatagaaaattta
aagagtagagaaaatattttaaaagctaaattagagattacagatttttttggtgataat
aatatactcatagtaaatggtgaagatgaactgttgggaaatttacaagaagaaaattat
aaattaataaaaacaggccttgaaaaaaatcataatatatatgcatatgacataaattta
aatgaaaagaaagtatcttttgaagttttagaaagtgaaagtaataaaaaagtttatata
aatgtgccggtaccaggaaaacataatgtattaaactcacttttagccattgcatgtgga
agggttttgggaatagaatttgaagatataaaaaaaggaattttaaacttagaaaccact
tccatgagattggatatagtaaagggtaagaaatttaatatagtagatgatagctataat
gcaagtcctgattctatgagggcagcaatagatgttttatgtaatattaaaggtaaaaaa
agatatgcggtacttggcactatgaaagaattaggagaagaatcacatagggctcatagg
gaaataggtaaatatgctggagaaaaatctataaatttaatagtactaggtgatttttca
aaatcttatatagaaggatatttagaaggaagtgagaataacagtaatagaggatatatt
ttagaggcaaaagataaagacgaagtaataacctatttaaatgatcatttagatagtgaa
gatgtagtattatttaaagcatctagatcagaacactttgaagaaatggttgaaagcttt
aaataa
DBGET
integrated database retrieval system
