Clostridium cochlearium: SAMEA4530647_1572
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Entry
SAMEA4530647_1572 CDS
T06756
Symbol
livM
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter system permease protein LivM
KO
K01998
branched-chain amino acid transport system permease protein
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
ccoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_1572 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4530647_1572 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_1572 (livM)
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SAMEA4530647_1572 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
SNV82504
LinkDB
All DBs
Position
1:complement(1533987..1534955)
Genome browser
AA seq
322 aa
AA seq
DB search
MNWISKKNIITLVLIILVYALSQILISIGIIDSYVVLNLVLIGINIILAVSLNLITGFTG
QFSLGHAAFMSVGAYTSAIMTAKLGYSFIPSLLASAIIASLVGLLIGIPTLRLKGDYLAI
ATLGFSEIIRIIFLNIEYLGGASGLNDIPQYTTWTWVYVMVIITVIAIKNFVNSYAGRAC
IAIREDEIAAEAMGINTTFYKVLAFIIGAFFAGIAGALYANYFYFIKPNNFGFMKSVDIL
VIVVFGGMGSIAGSILGAIVLSIISLSLQSIPELRMVIYAIILFLIMVYRPEGLLGKYEN
KKFKNMNWFKKGGNLNGGTNNR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaattggataagtaaaaaaaatattataacattagttctaattattcttgtatatgct
ttatcccaaattctaataagtataggcattatagattcctatgtagttttaaacttggtt
ttaataggtataaatataatacttgcagttagtttaaatttaataacgggatttacagga
cagttttcactaggacatgcagcttttatgagtgtaggggcatatacatctgcaataatg
acagcaaaattgggatattctttcattccaagtttattggcatcagcaataattgcgtct
ttagtagggctcttaataggaataccaactcttagattaaaaggagattatttagctatt
gcaactctaggatttagtgagattataagaataatatttttaaatatagaatatctagga
ggggctagtggacttaatgatataccccaatacactacttggacatgggtttatgtaatg
gtaataataactgtgattgctataaaaaactttgtaaattcttacgcaggaagagcttgt
atagctataagagaagatgaaatagcagcagaggctatgggcataaatacaactttttac
aaagtattagcctttataataggagctttctttgcaggcattgcaggagctttatatgca
aattacttttatttcataaaaccaaataattttggatttatgaaatctgtagatatatta
gttatagtagtatttggtggtatgggaagtatagcaggttctattttaggagctatagta
ctttcgataatatccttatcgcttcaaagtatacctgaacttagaatggttatatatgct
ataatacttttcttaataatggtatacaggccagaagggcttttagggaaatatgaaaat
aaaaaatttaagaatatgaattggtttaagaaaggaggaaacttaaatggcggtactaac
aatagataa
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