Clostridium cochlearium: SAMEA4530647_1581
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Entry
SAMEA4530647_1581 CDS
T06756
Name
(GenBank) multidrug resistance ABC transporter ATP-binding and permease protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_1581
Transporters [BR:
ccoh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMEA4530647_1581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_24
AAA
RsgA_GTPase
DEAD
APS_kinase
nSTAND3
AAA_29
AAA_16
Zeta_toxin
TsaE
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SNV82579
LinkDB
All DBs
Position
1:complement(1543158..1544897)
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AA seq
579 aa
AA seq
DB search
MNTLKRFIDYYKPYKSMFFMDMFCALTLSMIDLIFPLIVRYLLNDIYVNKSSSEIIHFIV
LIGIGLLIMYIIRYFCQYYISSWGHIMGARMEADMREDIFLHLQKQSFSYYDNTNTGQLM
SRIVNDLFDISELAHHGPEDVFISLLKIFGSFIILMKINVKITSVLFFITLFMIYFSYFY
NKKMKYIFKKNRVKIASVNSQIQDSLAGIRVVKSFSNEDLEVEKFKNGNNEYLQTKEKGY
FIMGKFFSGNGFFQGMLYLSVILVGGILIGTGEAQASDLVVYILYINIFLNPIEKLVNFT
EQFQKGITGFERFLEILNTKPEIEDVPGSIDLKNPKGEIEFKDVTFSYDAESTVLEGINI
KIEKGKTVALVGSSGSGKTTLCNLIPRFYEVDSGVIKIDGKNIRNIKLKSLRDSIGVVQQ
DVYMFAGTIKENIAYGKPNATDEEIYMAAKMANAHEFIMNLEKGYDTFVGERGAKLSGGQ
KQRISIARVFLKNPPILILDEATSALDNVSEKYIQQSLDELSKNRTTLVIAHRLSTIKNA
DEILVLTESGIQEKGTHEELIEKKGIYECLYNMQFKEVS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattaaaaagatttatagattattataagccttataaatctatgtttttcatg
gatatgttttgtgcccttaccttatctatgatagatctgatatttcctcttatagtgaga
tacttattaaatgatatatatgtaaataaaagtagtagtgaaataatacattttattgta
ttaataggaatcggtttattaattatgtatataattagatatttttgtcagtattacata
agttcatggggacatattatgggagctagaatggaagcagatatgagagaagatatattt
ttacatcttcaaaagcaatctttttcatactatgacaatacaaacactggtcaattgatg
tctagaatagtaaatgatttatttgacatttcggagcttgctcatcatgggccagaggat
gtatttatttctcttttaaaaatatttggttccttcataatacttatgaaaataaatgtt
aaaattactagcgtactattttttataactttatttatgatatatttttcttatttttat
aataaaaaaatgaaatatatatttaaaaagaatagagttaaaatagcctcagtaaattct
caaatacaagatagtttagcgggaattagagttgttaaatctttttctaatgaagactta
gaggtagaaaaattcaaaaatggaaataatgaatatttacaaactaaggaaaaaggttat
tttattatgggaaaattttttagtggaaatggattttttcaaggaatgctatatctttca
gtaattctagtaggaggaatacttataggaactggtgaagctcaagcatctgatttagtt
gtatatattctatatataaatatatttttaaatccaatagaaaagcttgtaaactttact
gagcaattccaaaagggtataactggatttgaaagatttttagagattttaaataccaaa
ccagaaatagaagatgtacctggttctatagatttaaagaatccaaaaggggaaatagaa
tttaaagacgtaacttttagttatgatgcagaatccactgtattagaagggataaacata
aaaatagaaaagggaaaaactgtagctttggttggttcttctggaagtggaaaaactaca
ttatgtaatcttataccaagattttatgaggtagatagtggagttatcaaaatagatggt
aaaaacataagaaatatcaaacttaaatccctaagagattcaataggcgtagttcaacag
gatgtttatatgtttgcaggaacaataaaagaaaatatagcttacggtaaacctaatgct
acagatgaagaaatatatatggctgcaaaaatggctaatgctcacgaatttataatgaat
ttagaaaagggttatgatacttttgtaggagaaagaggagccaagctttcgggaggacaa
aaacaaagaatatctatagcaagagtttttcttaaaaatccacctattttaatattagat
gaagctacttcagcattagacaatgtaagtgaaaaatatatacagcaatctttagatgaa
ttatctaaaaacagaacaacattagttattgctcatagattgagtacaataaaaaatgca
gatgaaatacttgttttaacggaaagtggaatacaagaaaagggcacccatgaagagctt
atagagaaaaaaggaatatatgaatgcctatataatatgcagtttaaagaagtttcataa
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