Clostridium cochlearium: SAMEA4530647_1608
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Entry
SAMEA4530647_1608 CDS
T06756
Name
(GenBank) SWF/SNF family helicase
Organism
ccoh
Clostridium cochlearium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Flavi_DEAD
AAA_11
SWI2_SNF2
Soc
Motif
Other DBs
NCBI-ProteinID:
SNV82875
LinkDB
All DBs
Position
1:complement(1569633..1572884)
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AA seq
1083 aa
AA seq
DB search
MLKEENLLQMFNESTSGNNHLKGQRILKNDLISSLNINAEDDFIYIESNVISESLFNEYN
TKIEIDTRQKSISSTFCTCPDYERNEFNKRNYCCKHLVATFYKALKDLENHPLLNEEKLV
QKSIFKNKNKNNILSMLLGDEKDKEEIKIEVYINKNEWKQNITAEFKIGLKDISTSKLYI
LKDINEFLSAYYNEFPIKYSKYFTFNIKNQRLSTKDKKLIEFIEMIKNIEGNYKYITKNA
ERNIQGKYINIPKYLVRDFFEVIKDHKVYLNEGFFYRTVETEILDKAPDIDFDLKKVKEN
YILKVQDGMPITLDSNNSVFLYGTTIYIPNYEFCYKIDPYFKVFNETRIVTIGEDEEETI
LRRLIPDLNFLSNNVSLSRNIKNKIVMDKCGFSFYFDQEGKKIVLTVNVKYGAFEFNIFQ
DCKEKIVYRDYKKEGEVIAQLKVLGFEEIKENFYLSGEDDYKFTFFKSEISKLQKIGEVY
YSENFKGIKSINSKSISGDIKVGKYDYFEIDFKIGDISPQETSNILRAFRDNLKYYKLKN
GEYIDLEELELKKFLKLLDAISPKKISDNHIEVDKNKGLYIDSYLEENKIKYIKGKKELK
EIKDRFKNIDKIKFQEPKDLNGNLRLYQKVGYNWFKTLDYLGFGGILGDEMGLGKTIQAI
SFILSNKNSKSLIVAPTSLVYNWIDEFEKFAPSLKVIAANGTKKERKDIIKNISNYDVVI
TTYNLLKRDLEDYKAINFDYCILDEAQYIKNSKSQNAKAVKKVKAKRRFALTGTPIENSL
MELWSIFDFIMPGYLYEEKRFSAKYSKRFQENPEVLEELNKLIKPFILRRKKKEVLKELP
DKIEKIMMVTLEDEQKKVYKAYANYAIELIQKKVKDNEFKKSKIAILSYITKLRQICLDP
TVIMKDYNGGNGKMETLVELLTQSIEQGHRILVFSQFTSVLKNIGKRISKEGIDFSYLDG
SIASEKRINMVKDFNEGKNSVFLISLKAGGTGLNLTSADVVIHFDPWWNPAVEEQATDRA
HRIGQENVVEVIKIIAKGTIEEKIILLQEEKKKLISELMGDELSNGESFASLTEEEILQL
FQM
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaagaaaatttattacaaatgtttaacgaaagtactagtggtaacaatcat
ttaaaaggtcaaaggattcttaaaaatgatttgatatcctctttaaatattaatgctgaa
gatgattttatttatatagaatccaatgtgatttcagaaagtctttttaatgaatacaat
acaaaaatagagattgatacaaggcaaaaaagtatttcttctacattttgtacttgtccg
gattacgagagaaatgagtttaacaaaagaaattattgttgtaaacatttagttgcaact
ttttataaagcattaaaagatttagaaaatcatccccttttaaatgaagaaaaattagtg
cagaaaagcatatttaaaaacaaaaataaaaataatattttatctatgcttttaggtgat
gaaaaagataaggaagaaataaaaatagaggtttatataaataaaaatgaatggaaacaa
aacattacagcagaatttaaaataggattaaaggatattagcacaagtaagctttatatt
ttaaaggatattaatgaatttttatcagcctattacaatgaattccctataaaatacagt
aaatactttacttttaatataaaaaatcaaagattaagtactaaagataaaaaacttatt
gaatttatagagatgataaaaaatatagaaggaaattataaatatattactaaaaatgca
gaaagaaatatacaaggcaagtatataaatattcctaaatatttagtaagagattttttt
gaggttataaaagatcataaagtatatttaaatgaaggatttttttacagaactgtagaa
acagaaattttagataaagctccagatatagattttgatttaaaaaaagtaaaggaaaat
tatattcttaaagtgcaagatggaatgccaataactttagattctaataatagtgttttt
ttatatggtacaactatatatattcccaattatgagttttgctataaaatagatccctat
tttaaagtatttaatgaaacaagaattgttactataggagaagatgaagaagaaactata
ttaaggagactcattccagatcttaattttttatctaataatgttagtttatctagaaat
ataaaaaataaaatagtaatggataaatgtggatttagtttttattttgaccaagaaggt
aagaaaattgtattaacagtaaacgtaaaatatggagcctttgaattcaatatctttcag
gattgtaaagaaaaaattgtgtatagagactataaaaaagaaggagaagttatagcccaa
ttaaaggtgttaggatttgaagaaataaaagagaacttttacttaagtggagaagatgac
tataaatttacatttttcaaaagtgaaataagtaaacttcaaaaaataggagaggtatat
tattctgaaaactttaaagggataaaatctattaattctaagagtatttctggagatatt
aaagtagggaaatatgattattttgaaatagactttaaaataggagatatatcaccacag
gaaactagtaatatattgagggcatttagagataacttgaaatattataaattgaaaaat
ggtgagtatattgacttagaagaattagagctaaaaaaattcttaaaacttttagatgca
atatctcctaaaaaaatatctgataatcatatcgaagtagataaaaataaaggtctttat
attgatagttatttagaagaaaataaaattaaatatataaaaggcaaaaaagaattaaaa
gaaataaaagataggtttaaaaatatagataaaataaaatttcaagaacctaaggattta
aatggaaatttaagattatatcaaaaagttggatacaattggtttaaaaccttagattac
ctaggttttggtggtattttaggagatgaaatggggcttggtaaaactattcaagcaatt
tcctttatattatctaataaaaatagcaaatctttgattgttgcacctacatctttagta
tataactggattgatgaatttgaaaagtttgctcctagtttaaaggtaattgcggctaat
ggaacaaaaaaagaaagaaaagatataattaagaacatatcaaactatgatgtagttata
acaacttataatttattaaaaagagatttagaagactataaggctataaactttgattat
tgtatattagatgaagcccaatatatcaagaattcaaaatcacaaaatgctaaagccgta
aaaaaagtaaaagcaaaaagaaggtttgcgttaacaggtacccctatagaaaattctctt
atggaactgtggtctatatttgactttataatgcctgggtatttatatgaagaaaaaaga
tttagtgcaaagtatagtaaaaggtttcaggaaaatccagaagttttagaggaattaaat
aaacttataaaaccctttattcttagaagaaaaaagaaggaagttttaaaagaattgcct
gataaaatagaaaaaattatgatggtaacattagaggatgaacaaaagaaagtatataaa
gcctacgcaaactatgcaatagaacttatacaaaagaaggtaaaggataatgaatttaaa
aaaagcaaaatagcaatactctcatatataacaaaattaagacaaatttgcttagatcca
actgtaataatgaaagattataacggtggcaatggaaaaatggagactttagtagaactt
cttactcagagtatagaacaaggtcatagaatacttgttttttcacaatttacatctgta
cttaaaaatattggtaaaaggattagcaaagaaggtatagattttagctatttagatggt
tctatagcttcagaaaaaagaataaatatggtgaaggattttaatgaaggaaaaaattca
gtatttttaataagtttaaaagctggtggcacaggattaaatttaacatcagcggatgta
gtaattcattttgatccttggtggaatccagcagtagaagaacaggctacagatagagca
catagaatagggcaagaaaatgtggtagaagttataaaaattatagctaaaggaactatt
gaagaaaagattattttacttcaagaggagaagaaaaaacttatatcagaattaatggga
gatgaattatctaatggtgaaagttttgcatctttaactgaagaagaaatacttcaattg
tttcaaatgtaa
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