Clostridium cochlearium: SAMEA4530647_1718
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Entry
SAMEA4530647_1718 CDS
T06756
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_1718 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_1718 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_1718 (hisS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SAMEA4530647_1718 (hisS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA4530647_1718 (hisS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4530647_1718 (hisS)
Prokaryotic type
SAMEA4530647_1718 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
tRNA-synt_2d
EF-hand_14
Motif
Other DBs
NCBI-ProteinID:
SNV84096
LinkDB
All DBs
Position
1:complement(1685918..1687237)
Genome browser
AA seq
439 aa
AA seq
DB search
MSKDIVKPSILPGFMELLPADQIVFNKMKDTIRHNYEKFGFIPLDTPTIEKSEILLAKGG
GETEKQIYRFNKGNTDLSLRFDLTVPLARYVAQHFSDLTFPFRRYHISKVFRGERNQKGR
FREFYQCDIDIIGNGSLSIINDAEIPSIIYQTFKELGFEDFTIRINNRKVLNGFFEGTDV
EDRKGVLRSIDKLEKIGESGVRKELQELGLEDEKIDKIINFINIKGSKEDVIKSLKELNI
ENDVFKEGVEELAKIIHYIKSFNVPDENYKIDLTIARGLDYYTGTVYETVLNNYPQIGSV
CSGGRYDNLAEHYTNQKLPGVGISIGLTRLFYQLREAKIIGENASSTLSQVLVIPVGDTM
EYSIKVANKLRENEIISELYLEDTKIGKKFAYADKLKIPYVILIGEDELKEEKVSVKNME
TGNQESMSLEEAIKIIKNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggatattgtaaagccatcaatattgccaggttttatggaattattgccggct
gatcaaatagtttttaacaaaatgaaggatacaataagacataattatgaaaagtttgga
ttcatccctttagatacacctactatagaaaagtcagaaatattattagctaaaggtgga
ggggaaaccgaaaaacaaatatatagatttaataaaggaaacacagatttatcattaaga
tttgatttaactgttccactagcaagatatgtagcacaacacttttcagatttgaccttt
ccttttagaagatatcatatatcaaaagtgtttagaggagagagaaatcaaaagggacgt
tttagagaattctatcaatgtgatatagatattataggtaatggtagtttgagcataata
aatgatgcagaaataccaagtatcatatatcaaacttttaaagaattaggatttgaagat
tttactataagaataaataatagaaaagttctaaatggattttttgaaggaacagatgta
gaagatagaaaaggtgtgctaagatctatagataagcttgaaaaaataggggaatctgga
gtaagaaaagaattacaagaattaggcttggaagatgaaaaaatagataaaataataaat
tttataaatataaagggttcaaaagaagatgtaataaaaagcttaaaagaactaaacata
gaaaatgatgtatttaaagaaggagtagaagaattagcaaaaattatacactatataaaa
agctttaatgttccagatgaaaattataaaatagatttaactattgctagaggattagat
tattatacaggaacagtttatgaaaccgtgttaaataattatccacaaataggaagtgtt
tgttctggtggaagatatgataatttggctgaacactataccaatcaaaagttaccaggt
gtaggtatatctataggattaacaaggttattttatcaattaagagaagcaaaaataata
ggagaaaatgcatcatcaacactttcacaggtattagttattcctgtaggggatactatg
gaatattcaataaaggttgccaataaattaagagaaaatgaaattatatcagagttatat
ttagaagatacaaaaataggtaaaaaatttgcttatgcagataaattaaaaataccttat
gtaatattaattggagaagatgagttaaaagaagaaaaagtaagtgttaaaaatatggaa
acaggtaatcaagaaagcatgtctttagaagaagcaattaaaataattaaaaatgtatga
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