Clostridium cochlearium: SAMEA4530647_1749
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Entry
SAMEA4530647_1749 CDS
T06756
Symbol
aseR
Name
(GenBank) putative transcriptional regulator
KO
K03892
ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoh03000
]
SAMEA4530647_1749 (aseR)
Transcription factors [BR:
ccoh03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
SAMEA4530647_1749 (aseR)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
DUF7347
TrmB
HTH_34
HTH_24
DUF6852
Staph_reg_Sar_Rot
MarR_2
MarR
HTH_40
Motif
Other DBs
NCBI-ProteinID:
SNV84415
LinkDB
All DBs
Position
1:1723171..1723515
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AA seq
114 aa
AA seq
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MYKLMNLFKLLSDETRLRILVLLYHKKLCVCELCGILEISQPNISKHLAKLRDMQFVKDE
RQEQFIFYSLNIEDKTLKGIFQNIIDNIDKYPVLKSDIKKIKDAEKYLKSCKQL
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttgtataaactaatgaatcttttcaaattgctttccgatgaaactcgcttgagaatattg
gttttgttgtatcataaaaaactatgtgtttgtgagttatgtgggattttagaaatatct
caacctaatatatcaaagcatcttgctaaacttagggatatgcaatttgtaaaagacgaa
aggcaagaacaatttatattttattctttgaatatagaagataaaactttaaaaggtata
tttcaaaatatcattgataatattgataaatatccagttttaaaaagtgatattaaaaaa
attaaggatgcagaaaaatatcttaaatcatgtaaacaactttga
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