Clostridium cochlearium: SAMEA4530647_1781
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Entry
SAMEA4530647_1781 CDS
T06756
Symbol
ccpN
Name
(GenBank) transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoh03000
]
SAMEA4530647_1781 (ccpN)
Transcription factors [BR:
ccoh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SAMEA4530647_1781 (ccpN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
Sigma70_r4
HTH_PafC
DUF977
MarR
HTH_24
HTH_5
HTH_Mga
CggR_N
Motif
Other DBs
NCBI-ProteinID:
SNV84706
LinkDB
All DBs
Position
1:complement(1752638..1753282)
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AA seq
214 aa
AA seq
DB search
MIKIKLSQRQKKIIKLVKENEPITSEQIASNLSVTRAALRPDLAILTMTGILDAKPKVGY
IYSKKPSYSLAYEYIRNLKVEQIMSDPVVVNEATTIYNAIVNLFLNDVGTLFVENEGVLV
GAVSRKDFLKFAMGGTDMHKVPIGVIMTRMPNIIMLKKDESAYDAAVKIIDHEIDSLPVV
EKENSEDKKDAYKIIGKVSKTNITNMVVNMAKNV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaaattaagctatcacagagacagaaaaaaataataaagttagttaaagaaaat
gagcctattactagtgaacaaatagcatcaaatttaagtgttactagagcggcattaaga
ccagatttagcaatacttacaatgacaggaatactagatgcaaaacctaaggttggatac
atatattctaaaaaaccctcttatagtctagcttatgaatacataagaaatttaaaagta
gaacaaattatgtctgatcctgtggtggttaatgaggcaaccactatatataatgcaata
gtaaatttattcctaaatgatgtaggtactttatttgttgaaaatgaaggtgtgctagta
ggtgcggtatctagaaaagattttttaaaatttgctatgggcggaacggatatgcataaa
gttccaattggagtaataatgacaagaatgcctaatattataatgcttaaaaaagatgaa
agtgcctatgatgctgcagtaaaaataatagatcatgaaattgatagtttaccagtagta
gaaaaagagaattcagaagacaaaaaggatgcttataaaataattggaaaagtatcaaaa
actaatattaccaatatggtagtaaatatggcaaaaaacgtttga
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