KEGG   Clostridium cochlearium: SAMEA4530647_1810
Entry
SAMEA4530647_1810 CDS       T06756                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ccoh  Clostridium cochlearium
Pathway
ccoh00010  Glycolysis / Gluconeogenesis
ccoh00020  Citrate cycle (TCA cycle)
ccoh00260  Glycine, serine and threonine metabolism
ccoh00280  Valine, leucine and isoleucine degradation
ccoh00310  Lysine degradation
ccoh00380  Tryptophan metabolism
ccoh00620  Pyruvate metabolism
ccoh00630  Glyoxylate and dicarboxylate metabolism
ccoh00640  Propanoate metabolism
ccoh00670  One carbon pool by folate
ccoh00785  Lipoic acid metabolism
ccoh01100  Metabolic pathways
ccoh01110  Biosynthesis of secondary metabolites
ccoh01120  Microbial metabolism in diverse environments
ccoh01200  Carbon metabolism
ccoh01210  2-Oxocarboxylic acid metabolism
ccoh01240  Biosynthesis of cofactors
Module
ccoh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SAMEA4530647_1810 (pdhD)
   00020 Citrate cycle (TCA cycle)
    SAMEA4530647_1810 (pdhD)
   00620 Pyruvate metabolism
    SAMEA4530647_1810 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    SAMEA4530647_1810 (pdhD)
   00640 Propanoate metabolism
    SAMEA4530647_1810 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SAMEA4530647_1810 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    SAMEA4530647_1810 (pdhD)
   00310 Lysine degradation
    SAMEA4530647_1810 (pdhD)
   00380 Tryptophan metabolism
    SAMEA4530647_1810 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SAMEA4530647_1810 (pdhD)
   00670 One carbon pool by folate
    SAMEA4530647_1810 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccoh04147]
    SAMEA4530647_1810 (pdhD)
Enzymes [BR:ccoh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SAMEA4530647_1810 (pdhD)
Exosome [BR:ccoh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SAMEA4530647_1810 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_3 Pyr_redox Biotin_lipoyl GIDA HI0933_like FAD_binding_2 FAD_oxidored AlaDh_PNT_C NAD_binding_8 DAO 3HCDH_N FAD_binding_3 Lys_Orn_oxgnase BSH_YknX BSH_CzcB BSH_CusB UDPG_MGDP_dh_N BSH_LcnD BSH_RND Thi4 2-Hacid_dh_C Trp_halogenase BSH_YhbJ Phage_ProQ_C_like DUF7231
Other DBs
NCBI-ProteinID: SNV85017
LinkDB
Position
1:complement(1779724..1780968)
AA seq 414 aa
MIKEIKLEKLSSGSKEGKVGKVHKSIGDNIKAGETLIEIEGKKGNIPLKAKEEGKINSIE
IEEGAIVKIGDTLLKIETEEISVKESAIDKDNNVNKSELECDIAILGAGPGGYVAAIQAA
KLGAKVVLIEKDKVGGTCLNRGCIPTKAFVRSSEVYSNIKNSEEYGISLQNPSIDIKKVV
SRKDNIVDKLVGGIHYLIEKHNIKLISGDGKLVDKNTIETKDSLVKAKNIVIASGSKPSI
LPIKGCDLKQVITSEEALDLKELPKKIAIIGGGVIGMEFAFIYANIGVEVSVVEYFDNIL
SMLDEDVIKEITEIGKEKGIRFYTSSKVEEILEDENEGCIVKFTNKNEEKFIFCDKVLMS
VGRQPYMENMGIEELGIELNQNKRGIKVNEKMETNIPNVYAIGECILFSLKYIY
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgataaaagaaataaaattagaaaaattatcctcaggtagtaaagaaggaaaagtaggt
aaagtacataaaagtataggagataatataaaagcgggagaaactctaatagaaatagag
ggcaaaaaaggtaatatacctttaaaagcaaaagaagaaggaaaaataaatagcatagaa
atagaagagggagctattgtaaaaataggcgatactctattaaagatagaaacagaagaa
ataagtgtgaaagaaagtgctatagacaaagataataatgttaataaatctgaattagaa
tgcgatatagctatattaggggcgggacctggaggatatgttgcagctattcaagcagct
aaacttggtgccaaagttgtacttatagaaaaagataaagttggaggaacttgtttaaat
agaggatgtataccaactaaagcttttgttagatcctcagaagtatatagtaatataaaa
aattcagaagaatatggaataagtttacaaaatccttctatagatattaaaaaggtagta
tcaagaaaagacaatattgtagataaacttgtaggaggaattcattatttaatagaaaag
cacaatataaagcttatttcaggagatggtaaattagtagataaaaataccatagagaca
aaagactctctagtaaaagctaaaaatatagtaattgcatctggttctaaaccaagtata
ttacctataaaaggatgtgatttaaaacaagttataactagtgaagaggcattagattta
aaagagctaccgaaaaaaattgctataataggtggcggcgttataggtatggaatttgct
tttatatatgctaatataggagtagaagtatctgttgtggaatattttgacaatattttg
tcaatgcttgatgaagatgttattaaagaaataacagagataggaaaggaaaaaggaata
agattttatactagctcaaaggtagaggaaattttggaagatgaaaatgaaggatgtata
gttaaatttacaaataaaaatgaagaaaagtttatattctgtgataaggtattaatgtct
gtaggaagacagccgtatatggaaaatatgggtatagaagaactgggaatagaattaaac
caaaataaaagaggaattaaagtaaatgaaaaaatggaaacaaatataccaaatgtatat
gctataggagaatgtatactattttccctaaaatatatatattaa

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