Clostridium cochlearium: SAMEA4530647_1857
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Entry
SAMEA4530647_1857 CDS
T06756
Symbol
lytC_14
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMEA4530647_1857 (lytC_14)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
SAMEA4530647_1857 (lytC_14)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccoh03036
]
SAMEA4530647_1857 (lytC_14)
Enzymes [BR:
ccoh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
SAMEA4530647_1857 (lytC_14)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
Peptidoglycan biosynthesis and degradation
Amidase
SAMEA4530647_1857 (lytC_14)
Chromosome and associated proteins [BR:
ccoh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SAMEA4530647_1857 (lytC_14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CW_binding_2
Amidase_3
Motif
Other DBs
NCBI-ProteinID:
SNV85444
LinkDB
All DBs
Position
1:complement(1821371..1822897)
Genome browser
AA seq
508 aa
AA seq
DB search
MGRKRNSLKFLIVFLSVFFIFTSKASATPGIKRFGGDNRYETSVKISRNNWTTSNYVILV
SGEDYPDALTASPLSKKYNAPILLTQSGKINSITLEEIKRLNAKNVIILGGPSIVSESTV
NILKNMAINCTRVYGKDRYETSVKVAKMVGTSNGIFIASGSGFADAVSAAPISASRQMPI
LLTSPNKLSDVVRNFIVENKNSTYYVVGGYASVNPIAVDGIINYKRLSGQNRYETNLAVI
NGFINNINFNSTYLASGQGYADALSGSAAAGKSSSPIILVNNSISTNSIIKSKLDIISTI
NVLGGTGVISDTLVNKLIQNQKTNIKVCLDAGHGGYDPGAIGPTGVKEKDVTLSITLKVG
RILKQNGVDVVYTRTTDNVSWPSNESEDLKKRCDIANASNAQYFVSIHANSASISEAKGT
EVYYSPGSVNGEKLAKYIQDEVVKATELYNRGIKTANFYVLRNTNAPAALVETGFISNPK
EEKLLKRDAFQEKMAQAIAKGILRAVNN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaaagaaattcgctgaaatttttaatagtatttttatcagtatttttcatt
tttacatctaaagcatcagcaactccagggattaagaggtttggtggagacaatagatat
gaaacatcagtgaaaatctcccgaaataattggacaacatctaactatgttatattggta
tctggggaggattatccagatgcattaactgcttcacccttatctaaaaaatataatgcg
cctattttattaactcaaagtggaaagataaatagtataactttagaggaaataaaaaga
ttaaatgctaaaaatgtaattatattagggggaccgtctatagtatctgaaagtacagta
aatatattaaaaaatatggcaataaattgtactcgtgtatacggcaaggatagatatgaa
accagtgtaaaggtggctaaaatggttggtactagcaatggaatatttattgcatcagga
agtggttttgcagatgctgtatcggcagcacctatatcagcttcaagacaaatgcctatt
cttcttacatcacccaataagttgtcagatgtagtaagaaattttatagtagagaataaa
aatagtacatattatgtagttggaggatatgcttcagttaacccaatagctgtagatggc
attatcaactataaaagattaagtggacaaaacaggtatgagacaaatttagcagttata
aatggttttataaataatataaattttaatagtacttatttagcaagtggacaaggttat
gcagatgcgctatctggatctgctgcagctgggaaaagttcatcaccaattatattggta
aataattcaattagcactaattctataataaaatcaaaattggatattatatctaccata
aatgtattaggaggcactggtgtaatatcagatacattagtaaataaactcatacaaaat
caaaaaacaaatataaaagtttgtttagatgcaggtcatggaggatatgatcctggagcc
attggtcctacaggagttaaagagaaagatgtaacactttcaataactttaaaagtggga
agaatacttaagcaaaatggtgtggatgttgtatatacaagaaccaccgataatgtatcc
tggccatcaaacgaaagtgaagatcttaaaaaacgttgtgatatagcaaatgcttctaat
gcacaatattttgtatccatacatgccaatagtgcaagtatttcagaagctaagggaaca
gaagtatattattctcctggtagtgtaaatggagaaaaattagcaaaatatatacaagat
gaagttgtaaaagctacagaactatataatagaggtataaaaacagcaaatttctatgtt
ttaagaaacacaaatgctccagcagcacttgtagaaacaggatttattagtaatcctaaa
gaagagaagcttttgaaaagggatgcttttcaagaaaaaatggcacaggctatagcaaaa
ggaattttaagagcagtgaacaactaa
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