Clostridium cochlearium: SAMEA4530647_1876
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Entry
SAMEA4530647_1876 CDS
T06756
Symbol
ybbD
Name
(GenBank) anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase
KO
K01207
beta-N-acetylhexosaminidase [EC:
3.2.1.52
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00520
Amino sugar and nucleotide sugar metabolism
ccoh01100
Metabolic pathways
ccoh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SAMEA4530647_1876 (ybbD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA4530647_1876 (ybbD)
Enzymes [BR:
ccoh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
SAMEA4530647_1876 (ybbD)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3
Motif
Other DBs
NCBI-ProteinID:
SNV85594
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All DBs
Position
1:1838881..1840113
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AA seq
410 aa
AA seq
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MKKSNLYMFLLLISFVFLLGCGRNNAYHSENIKNKTSNNKKSDTNSDTNNDNIKLKLNSM
SLDEKIGQLLVVGFDGYDINENIEKLIKENHVGGVILFSHNIENAHQLINLTNALKTLNS
HNKIPLFISVDEEGGRVSRMPREFKKLPSNKIIGKINNSNLSYNIGRIIAKELTFLGFNM
NFAPILDINSNPQNPVIGDRSFGNNVDIVSKLGIKTMEGLRDGNIISVVKHFPGHGDTSV
DSHVGLPLINHDMKRLKEFELMPFKEAINNNVDVVMISHILLPKIDPAYPATMSKTIITD
VLRRYLNFNKVVITDDMTMGAITNNYAISDAAIKSINAGTDIILVCHGYNNQTAIITSLK
EAVKNGTITEDRINESVYRILKLKEKYKINNNTVDNVDIDKINNEIKNIF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaatctaatttgtatatgtttttattattaatatcctttgtatttttattagga
tgcggtagaaataatgcttaccatagtgaaaatattaaaaataaaacctctaataataaa
aaatcagatactaattcagatactaataatgataatataaaattaaaacttaatagtatg
agtttagatgaaaaaattggtcaattacttgttgtaggctttgatggatatgatataaat
gaaaacatagaaaaattaattaaagaaaatcatgtaggaggagtcattttatttagccac
aatatagaaaatgcacatcaattaataaatttaactaatgcattaaaaactttaaattca
cataataaaatacctctgtttatatctgttgatgaagaaggtggaagggttagcagaatg
cctagagaatttaaaaaactccctagtaataaaattataggtaaaataaataatagtaat
cttagttacaatataggtagaataattgcaaaagaacttacattccttggatttaatatg
aattttgcaccgattttagatataaacagtaatccacaaaaccctgtaattggggataga
tcttttggtaataatgtagatatagttagtaaattaggtattaaaactatggaaggatta
agagatggtaacattatctctgtagtaaaacatttcccaggacatggtgatacttcagtt
gattctcatgtgggacttcctttaattaatcatgatatgaaaagattaaaagaatttgaa
ttaatgccttttaaagaggccataaataataatgtagatgtagtaatgatatcccatata
ttattacctaaaatagaccctgcctatcctgcaactatgtcaaaaacaataataacagat
gttttacgaagatatctaaactttaataaagtggttattacagatgatatgactatggga
gctattacaaataattatgctatttctgatgcagctattaaatctataaatgctggaaca
gatattattttagtatgtcatggttataataaccaaacagctataataacatccctaaaa
gaggccgtaaaaaacggtacaataacagaagatagaatcaatgaaagtgtttatagaata
ctaaaattaaaagaaaaatataaaataaataataatacagtagataatgtagatattgat
aaaataaataatgaaattaaaaatattttttaa
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