Clostridium cochlearium: SAMEA4530647_1882
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Entry
SAMEA4530647_1882 CDS
T06756
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_1882 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_1882 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_1882 (aspS)
03029 Mitochondrial biogenesis [BR:
ccoh03029
]
SAMEA4530647_1882 (aspS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SAMEA4530647_1882 (aspS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA4530647_1882 (aspS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMEA4530647_1882 (aspS)
Prokaryotic type
Other AARSs
SAMEA4530647_1882 (aspS)
Mitochondrial biogenesis [BR:
ccoh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SAMEA4530647_1882 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
SNV85634
LinkDB
All DBs
Position
1:complement(1843667..1845445)
Genome browser
AA seq
592 aa
AA seq
DB search
MGEALKGLKRTIMCGQLREDNINEQHTVMGWVQRKRNLGGLIFIDLRDRDGILQVVFGEE
INKEAFEKADTVRSEYCLAVTGKIIKRQAVNENLPTGMVELQGESIKILSESETPPIYIK
EDLDAGENIRLKYRYLDLRRPDMQKKLMVRHKTAKAVRDFLDAEGFLEIETPMLTKSTPE
GARDYLVPSRNYPGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQPEFTQ
IDLEMSFVEMDDVIDLNERLIKHVFKNVVGKDVKLPIERMPYKIAMSKYGSDKPDLRFEM
EIEYLEDVLKETNFKVFKDVIENGGTVGAIKAENCADMGRKQIDKLGEFVKTFKAKGLAW
IAYREDEIKSPIAKFLTDEELKAIIHKMDAKVGDLILIVSDAKERVVQQSLGQLRLHLAK
ELELLKDNDEFRFVWVTEFPLVSYNEEEDRWEAEHHPFTSPMDEDIPYLDTDPSKVRAKA
YDIVLNGEELGGGSIRIHDSKLQEKMFQVLGFTQEKAWERFGFLLEAFKFGPPPHGGLAF
GFDRMIMFLSGTENIKDVIAFPKNQNAFCPMTEAPNVVDEMQLDELGIKIKK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcattaaaaggactaaaaagaaccattatgtgtggtcaattaagagaagac
aatataaacgaacaacacacagtaatgggatgggttcaaagaaagagaaatcttggagga
ttaatttttatagatttaagagatagagatggaattcttcaagtagtatttggagaagaa
ataaataaagaagcttttgaaaaagcagatacagttagatcagagtattgcttagctgtt
acaggaaaaataataaaaaggcaagcagtaaatgaaaacttaccaacaggaatggttgaa
ttacaaggagaaagtataaagattttatcagaatcagaaactcctcctatatatataaag
gaagatttagatgcaggagaaaatataagacttaaatatagatatttagatttaagaaga
ccagatatgcaaaaaaaattaatggtaagacacaaaacagcaaaagctgttagagatttt
ttagatgcagaaggttttttagaaatagaaactcctatgcttactaaaagtactccagaa
ggtgcaagagactatcttgtgccaagtagaaactatcctggaatgttttatgcattgcct
caatcaccacagttatttaagcagctattaatggtatcaggttttgatagatattttcaa
atagtaaaatgttttagagatgaagatttaagagctaatagacagccagaatttacacaa
atagatttagaaatgtcctttgtggaaatggatgatgtaatagatttaaacgaaagatta
ataaagcatgtatttaaaaatgtagtaggtaaggatgttaagctacctatagaaagaatg
ccatataaaatagccatgagtaagtatggatcagataaaccagatctaagatttgaaatg
gaaatagaatacttagaagacgtattaaaagaaactaattttaaagtgtttaaagatgtt
atagaaaatggtggaactgttggagctataaaagctgaaaactgtgcagacatgggcaga
aaacaaatagataaattaggtgaatttgtaaagacatttaaagctaaaggattagcatgg
atagcttacagagaagatgaaataaaatctcctatagctaaattcttaacagatgaagaa
ttaaaagctattattcataaaatggatgccaaagtaggagatttaatacttatagtatca
gatgctaaggaaagagtagttcaacaaagtttaggtcaattaagacttcatttagccaaa
gaattagaactccttaaagataatgatgaatttagatttgtatgggttacagaatttcca
ttagtgtcctacaatgaagaggaagatagatgggaagctgagcatcatccatttacatct
cctatggatgaggatataccatatcttgatacagatccaagtaaagttagagcaaaggct
tatgacatagtattaaatggagaagaattaggtggaggaagtattagaatacacgatagc
aagcttcaagaaaaaatgttccaagttttaggatttacacaagaaaaagcttgggaaaga
ttcggattcttattagaagcatttaagtttggaccaccaccacatgggggattagctttt
ggatttgatagaatgataatgttcttaagtggaactgaaaatataaaagatgtaatagct
ttccctaaaaatcaaaatgcattctgcccaatgacagaagctccaaatgtagtagatgag
atgcaattagatgaattgggaataaaaataaagaagtaa
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