Clostridium cochlearium: SAMEA4530647_1906
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Entry
SAMEA4530647_1906 CDS
T06756
Symbol
cfiB
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00020
Citrate cycle (TCA cycle)
ccoh00620
Pyruvate metabolism
ccoh00720
Other carbon fixation pathways
ccoh01100
Metabolic pathways
ccoh01120
Microbial metabolism in diverse environments
ccoh01200
Carbon metabolism
ccoh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMEA4530647_1906 (cfiB)
00620 Pyruvate metabolism
SAMEA4530647_1906 (cfiB)
09102 Energy metabolism
00720 Other carbon fixation pathways
SAMEA4530647_1906 (cfiB)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
SAMEA4530647_1906 (cfiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_4
RnfC_N
GCV_H
GARS_A
Peptidase_M23
NQRA_N
HlyD_D23
ATPgrasp_ST
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
SNV85813
LinkDB
All DBs
Position
1:complement(1866932..1870372)
Genome browser
AA seq
1146 aa
AA seq
DB search
MVIKKFKRVLVANRGEIAIRIFRACEELGIRTVAIYSNEDKFSLFRTKADESYLIGKNKG
PVEAYLNIDEIISLAIKKGVDAIHPGYGFLSENSEFANKCREAGIEFIGPTGDIIEKLGD
KIQSKIVARKAGVKTIPGVEKAITSEEEAFKIARECGYPVMVKAAAGGGGRGMRIVKEEK
DLISTFNNAKDEARKAFGIDSLFIEKYLEGPKHIEVQILGDKYGNIVHLYERDCSIQRRH
QKVVEFAPALSISEEKREQICEDALKIARAVGYVNAGTVEFLVDKYGNHYFIEVNPRVQV
EHTITEMITGIDIVQSQILIAQGYSLDSPEINIKSQEDIRKRGYAIQCRVTTEDPMNNFA
PDTGKIDVYRSGSGFGIRLDGGNGFTGAIISPYYDSLLVKTTAWSRSFKDAASKAKRSIR
ELKVSGVKTNVGFLINVLNHPTFLKGDCTTNFINDNPELFDINAKADKELRLLKYIGEKV
VNETHGNKPNFDVPVVPKVYSNKEKYGTKQILDKEGAKGLVNWIKNQEKLLITDTTMRDA
HQSLMATRLRSKDMIKIAEAQSNLASDLFSMEMWGGATFDVSYRFLKEDPWKRLQELRKR
IPNILFQMLIRGANGVGYKSYPDNVIREFIKKSAENGIDVFRIFDSLNWLKGIEVAMDEV
LNNGKVAEACICYTGDILDETRDKYTLKYYVDTAKEMEKMGAHILGIKDMSALLKPYAAS
KLIKALKNEISIPIHLHTHDTTGNGVATILMAAEAGVDIVDTAFSSMSGLTSQPAMNSVV
AALKNTNRDSKLDLDNLQQISDYWTAVRPVYAQFESDLKSGTTEIYKYEIPGGQYSNLKP
QVESFGLGHKFNEIKEMYKKVNDMLGDIVKVTPSSKMVGDLAIFMVKNNLTPENILEKGE
SMAFPDSVVSYFKGMMGQPNGGFPKKLQNIVLKEDKPINARPGELLEPVDFNEIKKYLQD
KYKKEFTDEEIMSYALYPDVFEDYLKYIQEYGNLTNMGSDVFFHGLREGETSEIEIEEGK
TLIVRLLEIGKLHNGKRNLVFEVNGNRREIQILDKANNLKNLQQEDHIAMADKEDKSQIG
ASIPGSISKILVKEGDTVKKGDGIAVIEAMKMETNIVSNVSGKVKKIFVKENEQVKVGQL
IVKIGE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
gtggtgattaaaaaatttaaaagagttttggtggcaaatagaggagaaatagccataagg
atttttagggcttgtgaagagttaggtataagaacagttgccatatattctaatgaagat
aaattttctttatttagaacaaaagcagatgaatcttaccttataggaaaaaacaagggc
cctgttgaagcatacttaaatattgatgaaataataagtttagccattaaaaagggagta
gatgcaatacatccaggatatggttttctttctgaaaacagtgaatttgctaataaatgt
agagaggctggaattgaatttataggtcctacaggggatataatagaaaaattaggcgat
aaaattcaatctaagatagtagctagaaaagctggtgtaaaaactattccaggagtagaa
aaagctataacatctgaagaagaagcttttaaaatagcaagagaatgtggctatcctgtt
atggtaaaagcagctgccggtggtggcggaagaggtatgagaattgtaaaagaagaaaaa
gatttaatttcaacctttaataatgctaaagatgaagctagaaaagcttttggaatagat
agtttatttatagaaaaatatttagagggtccaaaacatatagaggttcaaattttagga
gataaatatggaaatatagttcatttatatgaaagggattgttcaatacaaaggagacat
caaaaagttgtggagtttgctccggcattatccatatctgaggaaaagagagaacaaatt
tgtgaggatgctttaaaaatagctagagctgtaggatatgtaaatgcaggtactgtggaa
ttcttagtagataaatatggaaaccactatttcatagaagttaatccaagagttcaagta
gaacacacaataactgaaatgataacaggaattgatatagttcaaagtcaaatattaata
gctcaaggatatagtttagattcaccagaaataaatataaaatctcaagaagatataagg
aaaagaggatatgcaatacaatgtagggtaaccacagaagatcctatgaacaattttgca
ccagatacgggaaaaatagatgtttatagaagtggatctggattcggtataagattagat
ggaggaaatggatttacaggagctataataagcccatattatgatagtttgctagttaaa
accacagcttggtctagaagttttaaagatgcagcaagtaaagcaaaaagatctataaga
gagttaaaagtatctggagtaaaaactaatgtaggttttttaataaatgtattaaatcat
ccaacatttttaaaaggtgattgtactactaattttataaatgacaatccagagttattt
gatataaatgcaaaagctgataaagaattaagacttttaaaatatataggagagaaagta
gttaacgaaacccatggaaacaaacctaattttgatgtaccagtagtacctaaagtttat
agtaataaagaaaaatatggaactaagcagatattagacaaagaaggggcaaaaggactt
gtaaactggataaaaaatcaggaaaagcttttaataacagatactacaatgagagatgct
catcaatctttaatggctactagactcagaagtaaagatatgataaaaattgcagaggct
caatccaatttagcatcagatcttttttctatggaaatgtgggggggagctacctttgat
gtatcctatagatttttaaaggaagatccttggaaaagactacaagaacttagaaagaga
attccaaatattttatttcaaatgcttataagaggggcaaatggtgtaggatataaaagt
tatccagataatgttataagagagtttataaaaaaatctgcagaaaatggaatagatgta
tttagaatattcgattctttaaactggttaaaaggtattgaagtagccatggatgaagtt
ttaaacaatggaaaagttgcagaagcatgtatttgttatactggggatattttagatgaa
actagagataaatatacattgaaatattatgtagatacagctaaggaaatggaaaaaatg
ggggctcatatacttggtataaaggatatgtctgctcttttaaaaccatatgcagcttca
aaattaataaaggcattaaaaaatgaaataagtattcctatacatcttcatactcatgat
actacaggaaatggtgtagctacaatacttatggcagcagaagcaggagtggatatagtt
gatacagcttttagcagtatgtctggattaactagtcagccagctatgaactcagttgtt
gctgcattaaaaaatacaaatagagatagtaaattggatttagataatttgcaacaaata
tcagattactggacagcagtaagaccagtatatgctcaatttgaatctgacttaaaatct
ggaactacagaaatatataaatatgaaataccaggaggacaatattctaatttaaaacct
caagtagaaagttttggattaggacataaatttaatgaaataaaagagatgtacaaaaaa
gtaaatgatatgctaggagatatagtaaaagttactccatcttctaaaatggtaggggat
ttagctatatttatggttaaaaataatttgacaccagaaaatatattagaaaagggtgaa
agtatggctttccctgattcagtggtttcatattttaaagggatgatgggacagcctaat
ggcgggttcccaaaaaaacttcaaaatatagttttaaaggaagataaacctataaatgca
agaccaggagaacttttagaaccagtagattttaatgaaataaaaaaatatttacaagat
aaatataaaaaagaatttacagacgaggaaataatgagttatgcactatatccagatgta
tttgaagattatttaaaatatatacaagaatatggaaatttaactaatatgggtagtgat
gtgtttttccatggtttgagagaaggagaaactagtgaaattgaaatcgaagaaggaaag
acacttatagttagacttcttgaaataggaaaattgcataatggtaaaagaaatttagta
tttgaagttaatggaaataggcgagaaatacaaatattagataaggctaacaatttaaag
aatctacaacaagaagatcatatagctatggcagataaagaagacaaatctcaaatagga
gcaagtatacctggaagcataagtaagatacttgttaaagaaggagacactgtaaaaaaa
ggagatggcatagcagtaatagaagctatgaaaatggaaactaatatagtatctaatgta
agtggtaaggttaaaaaaatatttgtaaaagagaatgaacaggtaaaagtaggacaatta
atagtaaaaataggagaataa
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