Clostridium cochlearium: SAMEA4530647_1941
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Entry
SAMEA4530647_1941 CDS
T06756
Symbol
mutS_2
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMEA4530647_1941 (mutS_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_1941 (mutS_2)
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SAMEA4530647_1941 (mutS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
MCMDC2_N
ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
SNV86470
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All DBs
Position
1:complement(1908637..1910997)
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AA seq
786 aa
AA seq
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MNKRALKVLEFYKIKEKLKSFVKTNAAKDIIDNLKPYESLYEVEMHLKETVEALDLLQTK
GEPPFEGIYDIRDILIRVEKAMVLLPGQLLKVASILRSARRFKDYVARKYEESPHENIED
ICESIEPLKGLEESVFNVVISDDEIADRASLKLYGIRRALRDKNDSLRDRVNSLVRKYSP
YLQENIYTIRGDRYVLPVRAEHKGAVPGLVHDQSSSGSTLFIEPMSLVNLNNEIKELLLK
EREEVERILEELSLKVYNNLDVININAKIIWELDFIFAKAKFASHNNCTLPKVNEDGVVD
IIEGKHLLIDAEKVVPTDIYLGKDFTSLIITGPNTGGKTVTLKTLGLIHIMGLSGLLIPA
KENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVDIISKADNKSLVLFDELGAGTDP
TEGAALAISILEELRKRKCKIVATTHYSELKGYALKTEGVENASVEFDVETLKPTYRLLI
GVPGKSNAFEISKRLGLSEYIIEEAKKNIESDSLRFEDLIEKLQSKSIKASDDARRAEMY
KLEADKLKDKYEDKLRVVEENREKLLRNAQDEARKIIKEAKEEADEILKNIRELERMGYS
STARQKLEEERKKLNNKMHKLEKEEENLNKEKGKKIEKVNLGEEVYLPKLDQKVIILSKP
DNKGEVQVQAGIIKINVKLEDLRVIDKPKEETKKARKREAKLRLKMVEPEIDLRGMDSME
AIYNTDKYLDEAYVAGLKEVILIHGKGTGVLRKSINDMLKRHPQVKRYRLGEYGEGGTGV
TVVELK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaagagctttaaaagtactagaattttataagataaaggaaaaattaaaaagc
tttgtaaaaactaatgcagcaaaggatataatagataatttaaaaccatatgaaagtctt
tatgaagtagaaatgcatttaaaagaaacagtggaggctttagatttacttcaaacaaaa
ggggaaccgccttttgaaggaatatatgatataagagatattttaattagagtagaaaaa
gctatggttttattaccaggtcaactactaaaagtagcatctattttaagatcagcaaga
agattcaaagattatgtggcaagaaaatatgaagaaagtcctcatgaaaacatagaagat
atatgtgaaagtatagagccgcttaaagggctagaagagtctgtatttaatgtggttata
agtgatgatgaaatagcggatagagcaagcttaaagctttatggtataagaagagcttta
agagataaaaatgattcattaagagacagggtaaattctttagttagaaagtactctcct
tatttacaggaaaatatttataccataagaggagatagatatgtactaccagtaagagca
gaacataagggtgctgtaccaggacttgttcatgaccaaagctcttctggatccacttta
tttattgagccaatgagcttggtaaatctaaataatgaaataaaagaattattgctaaaa
gaaagagaagaagtagagagaatattagaagagctttcattaaaggtttataataattta
gatgtaataaatattaatgctaagataatatgggagttggattttatatttgcaaaagct
aaatttgcaagtcataataattgtactttacctaaggttaatgaagatggagtagtagat
ataatagaaggaaaacatcttctaatagatgctgaaaaagtagttccaacagatatatat
ttaggtaaagattttacatctttaattataacaggacctaatacgggtggaaaaactgta
acactaaagactctaggtttgatacatataatgggattaagcggattgttaatacctgct
aaggagaattcaactatagcgttttttgaagaaatttttgctgatataggagatgaacaa
agtatagaacaaagtctttcaactttttcatctcatatggtgaatatagtagatataata
tctaaggcagacaataaatctttggtattatttgatgagttaggggcaggaacagatcct
acagaaggagccgccttagctatatcaattttagaagaattaagaaaaagaaaatgtaaa
atagtagctactactcattatagtgaattaaaaggatatgccttaaaaactgaaggagta
gaaaatgcttctgtagagtttgatgtagaaactttaaagcctacttatagattgttgata
ggtgtgccaggaaaatctaatgcctttgaaatatctaaaagattaggattaagtgaatac
attatagaagaggctaagaagaatatagaaagtgatagtttaagatttgaggatcttatt
gaaaaattacaatctaaaagtataaaagcttctgatgatgcaagaagagcagaaatgtac
aaattagaagcagataaattaaaagataaatatgaagataaattaagagtagtagaagaa
aatagagaaaaattattaagaaatgctcaagatgaggctagaaaaatcataaaggaagca
aaagaagaagcggatgagatattaaaaaatataagagaactagaaagaatgggttattca
tctacagctagacaaaagcttgaagaagaaagaaaaaaattaaataataagatgcataaa
cttgaaaaagaagaagaaaacttaaataaagaaaaaggaaaaaagatagagaaagtaaat
ttaggtgaagaggtttatcttcctaaattggatcaaaaggtaataatactttctaaacca
gacaataagggagaagttcaagtacaggcaggtattataaaaataaatgtaaaattagaa
gatttaagagttatagataaacctaaagaagagactaaaaaggcaagaaaaagagaagct
aaattgagattaaaaatggtagagccagaaatagacttaagaggaatggattctatggag
gctatctataatactgataaatatttggatgaggcatatgtagcaggacttaaagaagtt
atcctaatacatggaaaaggtacaggagttttgagaaaatctataaatgatatgttgaaa
aggcatccgcaagtaaaaaggtatagattaggtgaatatggagaaggcggaacgggtgtt
actgttgtagagttaaaatag
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