Clostridium cochlearium: SAMEA4530647_1954
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Entry
SAMEA4530647_1954 CDS
T06756
Symbol
thrS
Name
(GenBank) threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_1954 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_1954 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_1954 (thrS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
SAMEA4530647_1954 (thrS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SAMEA4530647_1954 (thrS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4530647_1954 (thrS)
Prokaryotic type
SAMEA4530647_1954 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
pAdhesive_11
Motif
Other DBs
NCBI-ProteinID:
SNV86602
LinkDB
All DBs
Position
1:complement(1922247..1924166)
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AA seq
639 aa
AA seq
DB search
MINITLKDGKVIEVEKGVRVSDIAMKISPALYKKAVGAKVNGEVAELMTEIKEDSQLEIL
TFDDEDGRRTVRHTASHILAQAVKRLYPEAKLAIGPAIDNGFYYDFDVDFTFTPEMLEKI
EKEMSKIIKENLEIERFELPREEAIKLAKDADEPYKVELIEELPEGEVISFYKQGDFVDL
CAGPHMPSTGKIKAIKLLSVAGAYWRGDEKNKMLQRIYGTAFLKKSELEAYLKLLEEAKR
RDHRKLGKELDLFSINEEGPGFPFFHPKGMVVRNILENFWREKHTKAGYDEIRTPVILNE
ELWHRSGHWDHYKENMYFTKIDNENFAIKPMNCPGSILVYKSHLHSYKEFPMRLGELGLV
HRHELSGALHGLMRVRCFTQDDAHIFMTKEQIRDEILNVIKLIDDFYKVFGFEYFVELST
RPEDSMGSDEDWEVATNGLKNALEAAGLEYKINEGDGAFYGPKIDFHLKDCIGRTWQCGT
IQLDFQMPERFDLTYIGQDGERHRPVMVHRVVFGSIERFIGILIEHFAGAFPTWLAPVQV
KVMTITDAQKDYANKVVDKLKENGIRVEFDDRNEKIGYKIREAQLQKVPYMIILGDKEVN
ENKVAVRSRKEGDLGAIALEEFIQKLNYEIENRVIENSK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgataaatataacactaaaagatggaaaagtaatagaagtagaaaaaggagtaagggta
agcgacatagctatgaaaataagtccagctttatataaaaaagctgtaggggctaaggta
aatggcgaagtagctgaacttatgacagaaataaaagaagatagtcagttagaaatatta
actttcgatgatgaagacggaagaagaacagtaagacatacagcttcacatatattagct
caagcagtaaaaagactttatcctgaagctaaattagcaataggaccagcaatagataat
ggattttattatgattttgacgtagattttacttttacaccagaaatgttagaaaagata
gaaaaagaaatgtcaaaaataataaaagaaaatttagaaattgaaagatttgaacttcca
agagaagaagctattaagcttgccaaagatgcagatgaaccttataaagttgaattaata
gaggaactaccagaaggagaagttatttctttttataaacaaggtgattttgtagattta
tgtgcgggaccacatatgccttctacaggaaaaataaaggcaattaaacttctttcagta
gcaggagcttattggagaggcgatgaaaaaaataaaatgcttcaaagaatatatggaaca
gcatttttaaagaaaagtgaattagaagcatatttaaaattattagaagaagctaagaga
agggatcataggaaattaggaaaagaattagacttatttagtataaatgaagaaggacca
ggattcccatttttccatcctaagggaatggtagtaaggaatattttagaaaacttctgg
agagaaaaacatactaaagcaggatacgatgaaataagaactccagttatattaaatgaa
gaactatggcacagatcaggacactgggatcattataaagaaaatatgtactttactaaa
atagataatgaaaactttgctataaaaccaatgaattgtccaggttcaattttagtttat
aaaagccatttacattcctataaggagtttccaatgagattaggggaacttggattagtt
catagacatgaattatctggagcattacatggacttatgagagttagatgttttactcaa
gatgatgcgcatatatttatgacaaaggaacaaataagagatgaaatattaaatgtaata
aaattaattgatgatttctataaagtttttggatttgaatactttgttgaattatctact
aggccagaagattcaatgggtagtgatgaagattgggaagttgcaactaatggattaaaa
aatgctttagaagcagcaggattagagtataaaataaatgaaggggacggagctttttat
ggtcctaagatagacttccatctaaaagattgtataggcagaacatggcaatgtggaact
attcagttagacttccaaatgccagaaagatttgatttaacatatataggccaagatgga
gaaagacatagaccagtaatggttcatagagttgtatttggaagtatagagagatttata
ggaatacttatagagcattttgcaggggcattcccaacatggttagctccagtgcaagta
aaagttatgactattacagatgcacaaaaagattatgcaaataaagtagttgataagtta
aaggaaaatggaataagagtagagtttgatgatagaaatgaaaagataggatataaaata
agggaagctcaacttcaaaaggtgccttatatgattattttaggagataaagaagtaaat
gagaataaagttgcagtaagaagtagaaaagaaggagatttaggagctattgctttagaa
gagttcatacaaaaattaaactatgaaatagaaaatagagtaatagaaaattctaaataa
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