Clostridium cochlearium: SAMEA4530647_1977
Help
Entry
SAMEA4530647_1977 CDS
T06756
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_1977 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_1977 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_1977 (valS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SAMEA4530647_1977 (valS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SAMEA4530647_1977 (valS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4530647_1977 (valS)
Prokaryotic type
SAMEA4530647_1977 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1b
RUBY_RBDX
DUF7130
DUF6487
DUF7129
ABC_tran_CTD
DUF1664
Zn_ribbon_8
NCD3G
KIF21A
DUF3450
DASH_Spc19
TMCO5
HypA
DivIC
NicX
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
SNV86786
LinkDB
All DBs
Position
1:complement(1940318..1942960)
Genome browser
AA seq
880 aa
AA seq
DB search
MNDNINIAKTYDPKEFEERIYKMWEEGKYFTPEVDKDKKPYTIVMPPPNITGKLHLGHAL
DNSMQDFLIRVKRMQGYSTLWLPGQDHASIATEVKVENELLKTGLKKKEMGREAFLEKVW
EWSDEYRERIRTQLKKMGVSADFTRESFTMDENLDKAVRAVFVKLYEEGLIYRGNRIVNW
CPKCMTALSDAEIEYEEQNGHFWHIKYPVVGSDEFLEIATTRPETMLGDTAVAVNPEDER
YAHLVGKKLILPLVNREIPIVADDYVDVEFGTGAVKITPAHDPNDYQVGKRHNLPEIIIM
NENGTINDLGGKYAGMDRYEARKAIVEDLKAEGYLVKIKEHVHNVSCHDRCGTIIEPMIS
KQWYVKMESLAKPAIDAVRNKDIEFVPERFDKIYFNWMENIQDWCISRQLWWGHRIPVWY
CKDCGEMIVSTEDLTKCSKCGSSNLKQDDDVLDTWFSSALWPFSTLGWPDKTDDLEYFYP
TDVLVTGYDIIFFWVARMIFSGLHSMKDIPFKTVLIHGIVRDSEGKKMSKSLGNGVDPLD
IIDKYGADALRFMLITGNAPGNDIRFYEERVESARNFANKIWNASRYVMMNLDKDLMEKY
KDCKDYNIADKWILSRINEVTKEVTDNIDKFELGMASQKIYEFMWNEFCDWYIELSKPVL
YGEDEKAKGVTFNVLFNVLTTGLKLLHPIMPFITEEIYTHIQDKEETITTSKWPKYKEEL
RDKSAEENMNYIIEAIKSLRNVRTEMNVPPSRKAKVMIYAVEGKKAFEEGTVYFEKLASA
SEVIFLNSKNDAPENAVSAVTKGGEMFMPLLDLVDLEKELERLNKEKQKLEKEIERVEKK
LSNANFVNKAPEAVVNEEKAKGEKYKEMLDAVLERIQSLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaatataaatattgctaaaacgtatgatccaaaagagtttgaagaaagaata
tacaaaatgtgggaagaagggaaatactttactccagaggtggataaagataaaaagcca
tacactatagttatgccacctccaaatataacaggaaaattacacttaggtcacgcatta
gataatagtatgcaagactttttaataagggttaaaaggatgcaaggctatagtactctt
tggcttccaggtcaagaccatgcaagtattgcaacagaagtaaaggttgaaaatgaatta
ttaaaaactggtcttaagaaaaaagaaatgggaagagaagcttttcttgaaaaagtatgg
gaatggtcagatgaatatagagaaagaataagaacccaattaaagaaaatgggtgtttca
gcagattttactcgtgaaagttttactatggatgaaaatttagataaggctgtaagagcg
gtttttgtaaaattatatgaagaaggattaatatatagaggaaatagaatagttaattgg
tgtccaaaatgcatgactgcattatcagatgcagaaatagaatatgaagagcaaaatgga
catttttggcatataaaatatccagtagtaggttctgatgaattcttagaaatagctact
acaagacctgaaactatgcttggagatactgcagtagctgttaaccctgaagatgaaaga
tatgctcatttagtaggtaaaaaacttatattaccattagttaatagggaaattcctata
gttgcagatgattatgtagatgttgaatttggtacaggagcagttaaaataacaccggca
catgatcctaatgattatcaagtaggaaagagacataaccttccagaaataataattatg
aatgaaaatggaactattaatgacttaggtggaaaatatgctggtatggatagatacgaa
gctagaaaagctatagttgaagacttaaaagccgaaggatatttagtaaaaataaaagaa
cacgttcataatgtaagttgccacgatagatgtggaacaataattgaacctatgatatca
aaacagtggtatgtaaagatggaaagtcttgcaaaaccagctatagatgctgtaagaaat
aaggatatagaatttgttcctgaaagatttgataaaatatattttaactggatggaaaac
atacaggattggtgcatatcaagacaattatggtggggacatagaatacctgtatggtat
tgtaaagattgtggagaaatgatagtttctacagaagatctaactaaatgtagcaagtgt
ggaagttctaatttaaaacaagatgatgatgtattagatacttggtttagttcagcacta
tggcctttttcaacccttggatggcctgataaaacagatgatttagagtatttttaccca
acagatgttttagtaacaggatatgatataattttcttctgggttgctagaatgatattt
tcaggtcttcatagcatgaaggatattccatttaaaacagtacttatacatggaatagta
agggattcagaaggtaaaaaaatgtcaaaatccttaggaaatggggtagaccctcttgat
attatagataagtatggagcagatgctttaaggtttatgctaattacaggaaatgctcca
ggaaatgatattagattttacgaagagagagtagaatcagctagaaactttgcaaataag
atttggaatgcttctagatatgttatgatgaatttagataaggatctgatggaaaaatat
aaagattgtaaagattataatattgcagataaatggatattatcaagaataaatgaagta
actaaagaagtaacagataacatagataaatttgaattaggaatggcgtctcaaaagatt
tatgaattcatgtggaatgaattttgtgattggtatatagagttatcaaaacctgtatta
tatggagaagatgaaaaggcaaagggagttacatttaatgttttatttaatgttttaact
acaggacttaagttattacatcctataatgccatttataactgaagaaatatacactcat
attcaagataaagaagagactataactacttcaaaatggcctaaatataaggaagaacta
agagataaatctgcagaagaaaacatgaattatataatagaagctataaaatccttaaga
aatgtaagaacagaaatgaatgtacctccttcaagaaaagcaaaagttatgatttatgct
gttgaaggtaaaaaagcttttgaagaaggaactgtttattttgaaaaattagcttcagct
agtgaagtgatatttttaaattctaaaaatgatgcaccagaaaatgcagtatcagcagta
acaaaaggtggcgaaatgtttatgccattacttgatttagttgatttagaaaaagaatta
gaaagattaaataaagaaaaacaaaaactagaaaaagagatagaaagagttgaaaagaaa
ctttcaaatgctaattttgtaaataaagctccagaagctgttgtcaatgaagaaaaagcc
aaaggtgaaaaatacaaagaaatgttagatgctgtattggaaagaattcaatctttaaaa
taa
DBGET
integrated database retrieval system
