Clostridium cochlearium: SAMEA4530647_2012
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Entry
SAMEA4530647_2012 CDS
T06756
Symbol
proW
Name
(GenBank) glycine-betaine binding permease protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_2012 (proW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_2012 (proW)
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
SAMEA4530647_2012 (proW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
SNV87131
LinkDB
All DBs
Position
1:complement(1988507..1989331)
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AA seq
274 aa
AA seq
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MFFKFHVGPFFEFIVEWLKANIEPFFNLIKIIHETLIKGLENILMFPPSIVVIILFALLA
YKLADKKVAVFTFVGLFFIDSMQLWSQTMQTLSLVLVSALIALLIGVPFGIMSARSEKAN
KILRPILDFMQTMPAFVYLIPAVLFFGMGKVPGAIATVIFSMPPAVRLTNLGIRQVPEEV
VEAAKSFGSTPKQMLYKVQLPIALPTILAGVNQTIMLALSMVVVSAMIGAGGLGREVYQG
ITQLKIGQGFESGLAVVILAMILDRMTQALSSNR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttttttaaatttcatgtaggacctttttttgaatttatcgttgaatggctaaaagct
aatatagaaccgttctttaatttaataaaaattattcatgaaacacttataaaaggattg
gaaaatatacttatgtttccacctagcatagtggttattatattatttgctttattagca
tacaaattagcagataaaaaggtagctgttttcacctttgtaggattattttttatagat
tctatgcaattatggagtcagactatgcaaacactatcattggttttagtttcagcctta
atagcattattgataggggtgccatttggtattatgtctgcaagaagtgaaaaagctaat
aaaatattaagacccattttagattttatgcagacaatgccagcttttgtatacttaata
ccagcagtattgttttttggtatgggaaaagtaccaggagcaatagctactgttatattc
tcaatgcctcctgctgtgagattaactaatttaggaataagacaagttccggaggaagtg
gtagaagctgcaaaatcctttggttctacacctaaacaaatgctatataaagtacaacta
cctatagctttacctactatattagcaggtgttaatcaaactataatgcttgcattatca
atggttgttgtttcagcaatgataggagcaggaggattaggtagagaggtttaccaaggt
ataacccaattaaaaataggtcaaggttttgaaagtggtcttgcagtagttatattggct
atgatattagataggatgactcaagcactttcaagcaatagataa
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