Clostridium cochlearium: SAMEA4530647_2017
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Entry
SAMEA4530647_2017 CDS
T06756
Symbol
rbsB
Name
(GenBank) ribose ABC transporter periplasmic D-ribose-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
ccoh02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_2017 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SAMEA4530647_2017 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_2017 (rbsB)
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SAMEA4530647_2017 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PucR
Motif
Other DBs
NCBI-ProteinID:
SNV87186
LinkDB
All DBs
Position
1:complement(1996867..1997787)
Genome browser
AA seq
306 aa
AA seq
DB search
MKKRKLKLLSLVLTGVMMAAGFAGCGNSDEKDNAKTGESKKIGMVISTLNNPFFVSMKEG
AEKKAKELGYELLVLDSRDDGATERSNVEDLVQKGAEVIIINPTDSDAVGNAIQVANDSK
IPVVTVDRNSNKGEVVSHIASDNVAGGKMAAEFILEKLGEKGNIVEIQGQPGTSAARDRG
KGFHHGISGKDGIKVVASQPADFDRQKGLSVMENIMQATPDFDAVFCHNDEMALGAAKAL
AGKKVTIVGFDGNDEAVKAVESGELTATVAQQPDLMGSIAIENAVKIAKGESVEKEIPVE
LKLIKK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaaaattaaaattattgtcattagttttaacaggggttatgatggcagct
ggttttgcaggatgtggaaatagtgatgaaaaagataatgctaaaactggagaaagtaaa
aaaatagggatggtaatatctacattaaataatccattctttgtatctatgaaagaagga
gcagaaaagaaagcaaaagaattaggatatgaacttttagtattagattctagagatgat
ggagctactgaaagatcaaatgtagaagatttagtacaaaagggtgcagaagttataatt
ataaatcctactgatagtgatgcagttggtaatgctatacaagtagctaatgatagtaaa
attcctgtagttacagtggatagaaattcaaataaaggagaagtagtttctcatattgct
tcagacaatgtagctggaggtaagatggcagcagaattcatattagaaaagttaggtgaa
aaaggaaatatagttgaaatacaaggacaaccaggtacatctgcagcaagagatagagga
aagggcttccaccatggaatatcaggaaaagatggtataaaggtagttgctagtcaacca
gcagattttgatagacaaaaaggtctaagtgtaatggaaaatataatgcaagctactcca
gattttgatgctgtattctgtcataatgatgaaatggctttaggggcagctaaggcatta
gctgggaaaaaagttactattgttggatttgatggaaatgatgaggcagtaaaagctgtt
gaaagtggagaattaactgctacagttgcacaacaaccagatttaatgggtagcattgca
atagaaaatgcagttaaaatcgccaaaggtgaatcagtagagaaagaaatacctgtagaa
ttgaaacttataaaaaaataa
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