Clostridium cochlearium: SAMEA4530647_2212
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Entry
SAMEA4530647_2212 CDS
T06756
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00470
D-Amino acid metabolism
ccoh01100
Metabolic pathways
ccoh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA4530647_2212 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA4530647_2212 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
SAMEA4530647_2212 (alr)
Enzymes [BR:
ccoh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SAMEA4530647_2212 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
Precursor biosynthesis
Racemase
SAMEA4530647_2212 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Orn_Arg_deC_N
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
SNV88542
LinkDB
All DBs
Position
1:complement(2195658..2196821)
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AA seq
387 aa
AA seq
DB search
MFKHLRPVWAEIDLDKLAYNMQQIKNLCKSKEIIAVVKADAYGHGALDIAPILLESGATR
LAVAVLNEGIELRRGGIDAPIMVLGFTPDSLIETALRYNIEQTVYSYEIAKQISDVARKS
NMLAKIHIALDTGMGRIGFLPSKESIEEISRLSKLPNIQIEGIFSHFASADEKDKTYTKL
QFNKFLWVCNNLQERGIDIKVRHIANSAAIIDMPELHLEGVRPGIIMYGYYPSSEVNKER
LDLKPVMSLKTTIVHIKNMEKGKYISYGREFKTEKESIIATLPVGYADGYNRSLYNKGGK
VILKEQLAPLAGRVCMDQCMIDVSHIKDVKIGDEVILMGEDKGIKMTAEEIGNLLGTINY
EVTCMISKRVPRVYIRNGNIVGIRNYV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacatttaagacctgtatgggcagaaatagatctagacaaattagcttataat
atgcaacaaattaaaaatctgtgtaaaagtaaagagattatagcggtagtgaaagctgat
gcttatggtcatggagcattagatattgccccaattttattagaaagtggagctactaga
ttagcagttgcagtattaaatgaaggaatagaacttagaagaggtggaatagatgcacct
ataatggtattaggatttactcctgatagtttaattgaaactgcattaagatataatata
gaacaaactgtatatagctatgaaatagcaaaacagatatctgatgttgctagaaagtct
aatatgttagctaaaattcatatagctttagatacaggtatgggtagaataggttttttg
cctagtaaagaaagtatagaagaaattagtagattaagtaaattacctaatatacaaata
gaaggaattttttctcattttgcatctgcagatgaaaaagataaaacttatactaaacta
caatttaataaatttctttgggtttgtaataatttacaagaaagggggatagatataaaa
gtaagacatattgcaaatagtgctgccattatagatatgccagaattacatttagaaggg
gtaaggcctggtattataatgtatggatattatccatctagtgaagttaataaggaaaga
ctagatctaaaaccagttatgtctttaaaaactactatagtccatattaaaaatatggaa
aaggggaagtatataagttatggaagagaatttaaaacagaaaaggaaagcataatagca
actttaccagtaggatatgcagatggatataatagatccttatataataaagggggaaaa
gttatattaaaagaacagttagctccattagcaggaagagtatgtatggatcagtgcatg
atagatgtaagtcacataaaagatgtgaaaataggagatgaagtaatccttatgggagaa
gataagggcataaaaatgacagcagaagaaataggaaatttattaggaacaattaattat
gaagtaacctgtatgataagtaagagggtgcctagagtatatataaggaatggaaatata
gttggaataagaaattatgtataa
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