Clostridium cochlearium: SAMEA4530647_2324
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Entry
SAMEA4530647_2324 CDS
T06756
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_2324 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_2324 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_2324 (cysS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SAMEA4530647_2324 (cysS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SAMEA4530647_2324 (cysS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAMEA4530647_2324 (cysS)
Prokaryotic type
SAMEA4530647_2324 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
CysS_C
tRNA-synt_1f
DUF7201
Cir_Bir_Yir
NAPRTase_N
Motif
Other DBs
NCBI-ProteinID:
SNV89430
LinkDB
All DBs
Position
1:complement(2288355..2289752)
Genome browser
AA seq
465 aa
AA seq
DB search
MKLYNTLTRQKEEFVPLKPGEVNMYVCGPTVYNFFHIGNGRTFIVFDTVRRYLEYRGYKV
KFVQNFTDIDDKMINRANDEGITVKELGERFIKEYYKDADALNIERATVNPRATEFMEEI
IQFVKDLVDRGYAYEVDGDVYFHTKKFSEYGKLSGQNLEDLQAGARINVDERKKDAMDFA
IWKKQKPGEPAWESPWGMGRPGWHIECSCMAHNLLGDTIDIHAGGYDLIFPHHENEIAQS
ECRTGKPFAKYWMHSAFLNIDNKKMSKSLNNFFTAREILEKYDADVVRLFMLSAHYRAQL
NFSEELLQSAKSALERLYNAIYNLENLSNEVKRNELNEEEKEYIKRLDEYRQKYIEKMDD
DFNTADAIAVIFDMIKDININIKSDSSKEIIDYALSIIRELGGPLGILQKSTEEDVEDEI
QELINKREEARKEKNWALADEIRDKLKERGILLEDTPQGVRWKRI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatataatactttaaccagacaaaaagaagaatttgtccctttaaaacctgga
gaagttaatatgtatgtttgtggtcccacagtatacaattttttccatataggaaacgga
agaacttttatagtttttgatacggtaagaagatatttagaatatagaggatataaagtt
aaatttgtacagaactttacagatatagacgataaaatgataaatagagccaacgatgaa
ggtataactgttaaagaattaggagaaagatttataaaagaatattataaagacgcggat
gctttaaatatagaaagagctaccgtaaatccaagagctactgaatttatggaagaaata
atacagtttgttaaagatttagtagataggggatatgcttatgaagtagatggagatgta
tatttccatactaaaaaatttagcgaatatggtaaactatcaggacaaaatttagaagat
ttgcaagcaggtgctagaatcaatgtagatgaaagaaaaaaagacgctatggactttgct
atttggaaaaagcaaaaaccgggtgaacctgcatgggaaagtccatggggtatgggaaga
ccaggatggcatatagaatgttcttgcatggctcacaatttgttaggagatacaatagat
atacatgcaggaggatacgatttaatttttcctcatcatgaaaatgagattgctcaaagt
gagtgtagaacaggaaagccatttgcaaaatattggatgcattctgctttcttaaatata
gataataaaaagatgtctaaatcattaaataacttttttactgcaagagaaatattagaa
aaatatgatgctgatgtagtaagattatttatgttatcagcccattatagagcacaacta
aattttagtgaagaattgttacagtctgctaaatcagcgctagaaagattatacaatgct
atttataatttggaaaacttgtccaatgaagtaaaaagaaatgagttaaatgaagaggaa
aaagaatacatcaaaagactagatgaatacagacaaaaatatatagaaaaaatggatgat
gattttaatactgcagatgctattgctgtaatatttgacatgataaaagatattaatatc
aatattaaatctgattcttctaaagaaataattgattatgctttatcaattataagagaa
ttaggaggacctttaggtatacttcaaaagtcaacagaagaagatgttgaagatgaaatt
caagaattaataaataaaagagaagaagctagaaaagaaaaaaattgggctttagcagat
gaaataagagataaattaaaagaaagaggaattttactagaggatacaccacaaggagta
agatggaaaagaatataa
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