Clostridium cochlearium: SAMEA4530647_2332
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Entry
SAMEA4530647_2332 CDS
T06756
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_2332 (radA)
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA4530647_2332 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
Lon_C
Rad51
AAA_14
AAA
GvpD_P-loop
AAA_22
ABC_tran
NTPase_1
AAA_24
RecA
nSTAND3
DUF7125
ATP-synt_ab
AAA_29
PAXNEB
ATPase_2
SLFN-g3_helicase
divDNAB
NACHT
NPHP3_N
DUF7129
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
SNV89493
LinkDB
All DBs
Position
1:complement(2296671..2298038)
Genome browser
AA seq
455 aa
AA seq
DB search
MAKVKSCFVCQECGYESPKWLGKCPDCNTWNSMVEEIKSSKQADKKFSYNLNSNASESIV
DIKSITYERISTGINELNRVLGGGIVRGSLTLISGDPGIGKSTLLLQAANNIAKNYGKIL
YISGEESQEQIRLRGERLQALCKEVYILSETDINVILGNIDKLKPKFIILDSIQTLYNPE
ISSAPGSVSQVRECANTIMRLAKTNNIPFFIVAHVTKQGALAGPKVLEHMVDTVLSFEGE
RTEEFRILRTIKNRFGNTSEIGVFEMRENGLSEITNPSEVFLEDISLNKEGSTIIGIMEG
SRPILVEVQALVTKTNAPMPRRTVVGVETSRINLILAVLEKKLKIPFYQFDVYINVVGGL
NIEGTFADLGIALSLISSVKGIETKLDKMLVVGEIGLTGEVRPVMFCDRIINEGKKMGFK
NFIIPSRNKDKIIQDDRSINIIGTQYLRETINRVF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtaaaaagttgttttgtatgtcaagaatgtggatatgaatcccccaagtgg
ttaggtaagtgtccagattgtaatacttggaatagtatggttgaggagataaaaagtagt
aaacaagcagataaaaagtttagttataacttgaatagtaatgcttcggaaagcatagta
gatataaagtcaattacatatgaaagaatcagtacgggaattaatgagttaaatagagta
ctaggaggaggaatagttagaggttccttaactcttatatcaggtgatccgggtatagga
aaatcgactttattattacaagctgccaataatatagctaaaaattatggcaagatatta
tacatatcaggagaggaatctcaagagcaaataagactaagaggagaaagattacaggct
ttatgtaaagaagtatatatattgtctgaaacagatattaatgttatattaggcaatatt
gataaattaaaacctaaatttataatattagattcaattcaaactttatacaatccagaa
atatcttcagcaccaggaagtgtttcacaagttagagaatgtgcaaatacaattatgagg
ttagctaaaactaataacataccgttttttatagtagctcatgtcacgaaacaaggggca
ttagcaggccctaaagttttagaacatatggtagatacagttctatctttcgaaggagaa
agaacagaagaatttagaatacttagaacaattaagaatagatttgggaacactagtgaa
attggtgtgtttgaaatgagggaaaatggacttagtgaaataactaatccatcagaagtt
tttttggaagatataagtcttaataaagaaggttcaactataataggaataatggaagga
agtagacctatattagtagaggttcaagcattagtaacaaaaacaaatgcacctatgcca
agaagaacagtagtaggagtagaaacatctaggataaatttaattttggcagtattagaa
aagaaattaaaaataccattttatcaattcgatgtgtatataaatgttgttggtgggctc
aatatagaaggaacttttgcagatttaggtatagcattatcattaatatctagtgtaaag
ggaatagagactaaattagataagatgttggttgtaggcgaaataggattaactggagaa
gtgagaccagtaatgttttgtgatagaataataaatgaaggcaaaaagatgggatttaaa
aattttattattccttcaagaaataaggataaaatcatacaggatgatagaagcataaat
attataggaacacaatatttaagggaaacaataaatagagtattttag
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