Clostridium cochlearium: SAMEA4530647_2356
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Entry
SAMEA4530647_2356 CDS
T06756
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA4530647_2356 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_2356 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoh03016
]
SAMEA4530647_2356 (lysS)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAMEA4530647_2356 (lysS)
Amino acid related enzymes [BR:
ccoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA4530647_2356 (lysS)
Transfer RNA biogenesis [BR:
ccoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMEA4530647_2356 (lysS)
Prokaryotic type
Other AARSs
SAMEA4530647_2356 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SNV89595
LinkDB
All DBs
Position
1:complement(2322126..2323634)
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AA seq
502 aa
AA seq
DB search
MSNEQKNLMNEEEEFNKLIQERRQKFFDLQAEGKDPFEVTKVERTHTSQEIKNNFEELED
KEVTVAGRLMSKRVHGKAGFSDIHDRYGKIQLYIKINDVGEERLKEYKSFDIGDFVSITG
TVFKTRTGEVSIHITDFKLIAKSLRPLPEKWHGLKDPDLRYRQRYVDLIVNQDVRDTFMK
RTKIIKHMREFLDARDYIEVETPVLSPIAGGAAARPFTTHHNALDIDMYLRIATELYLKR
LIVGGFEKVYEIGKNFRNEGIDIRHNPEFTMIELYEAYADYNDMMEITENMVAYIAEKVC
GSTKVNYEGTEIDFKPPWKRITMVDAVKEFSGVDFNEIKTDEEARELLKDKEFELKKKIE
DCTKADVLNVFFEEYVEDKLIQPTFVCDYPVEISPLSKKKTDNPAYTERFEGFVYGRELC
NAYTELNDPIVQKERFIQQLKERELGDDEAFMMDEDFINALEIGMPPTGGLGIGVDRLVM
FLTDSHSIRDVILFPTMKPTHN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaacaaaagaatttaatgaacgaagaagaagagtttaataaacttattcaa
gaaagaagacaaaagttttttgatcttcaagcggaggggaaagatccgttcgaagtaact
aaggttgaaagaactcatacttctcaagagataaaaaataattttgaagaattagaagat
aaagaagttactgtagctggaagattgatgtcaaaaagagtacatggtaaggctggattt
tctgatatccatgatagatatggaaaaattcagctttatattaaaataaatgatgtggga
gaagaaagattaaaagaatataaatcttttgatataggagattttgtttctattacagga
acagtttttaaaacaagaacaggagaagtttctatacatataacagattttaaacttata
gcaaaatctttaagaccattaccagaaaagtggcatggcttaaaggatccagatttaaga
tatagacaaagatatgtagatttaattgtaaatcaagatgtaagagatacttttatgaaa
agaactaaaataataaagcatatgagagaatttttagatgctagagattatatagaagtt
gaaacacctgtattatcaccaatagctggaggagcagcagcaagaccttttacaactcat
cacaatgctttagatatagatatgtatttaagaattgctactgagctttatttaaaaaga
ttaatagttggtggatttgaaaaagtatatgaaataggtaaaaactttagaaacgaaggc
atagacataagacataatcctgaatttactatgattgaattatatgaagcttatgcggat
tataatgatatgatggaaataacagaaaatatggtagcttatatagcagaaaaagtttgt
ggaagtacaaaagtaaattatgaaggaacagaaatagattttaaaccgccttggaagaga
attactatggtagatgctgtcaaagaattttcaggtgtagattttaatgaaataaaaaca
gatgaagaagcgagggagcttcttaaagataaagaatttgaattaaagaagaaaatagag
gattgtacaaaagcagatgttttaaatgttttctttgaggaatatgttgaagataaatta
attcaacctacttttgtatgtgactatccagttgaaatatctcctttaagtaaaaagaaa
actgataatcctgcttatacagaaagattcgaaggttttgtatatggaagagaattatgt
aatgcatatactgaactaaatgatcctatagtacaaaaggagagatttattcaacaatta
aaagaaagagaattaggcgatgatgaagcatttatgatggacgaggactttattaatgct
ttagaaataggtatgcctccaacaggaggactgggaataggagtagacagactagttatg
ttcttgacagattctcattccataagagatgtaattttattcccaactatgaaaccaaca
cataattaa
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