Clostridium cochlearium: SAMEA4530647_2431
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Entry
SAMEA4530647_2431 CDS
T06756
Symbol
accC
Name
(GenBank) biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00061
Fatty acid biosynthesis
ccoh00620
Pyruvate metabolism
ccoh00640
Propanoate metabolism
ccoh00720
Other carbon fixation pathways
ccoh01100
Metabolic pathways
ccoh01110
Biosynthesis of secondary metabolites
ccoh01120
Microbial metabolism in diverse environments
ccoh01200
Carbon metabolism
ccoh01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SAMEA4530647_2431 (accC)
00640 Propanoate metabolism
SAMEA4530647_2431 (accC)
09102 Energy metabolism
00720 Other carbon fixation pathways
SAMEA4530647_2431 (accC)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAMEA4530647_2431 (accC)
Enzymes [BR:
ccoh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
SAMEA4530647_2431 (accC)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
SAMEA4530647_2431 (accC)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
RimK
ATP-grasp_3
GARS_A
ATP-grasp_4
ATPgrasp_ST
ATP-grasp_5
ATPgrasp_Ter
MinE
ParB_dimer
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
SNV90166
LinkDB
All DBs
Position
1:complement(2390855..2392195)
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AA seq
446 aa
AA seq
DB search
MFKKILIANRGEIAVRIIRACREMGIETVAVYSEIDKESLHVEMADEAICIGPPSPKDSY
LNIKNILSATVLTGAEAIHPGFGFLSENSKFASMCKECNIVFIGPDSELIDKMGNKSNAR
RIMEEAGVAVVPGSKKPIENSQEALDLAEKIGYPVMIKASAGGGGRGIRVVKHEKELIEA
INTAKKEALSAFGDDSMYMEKYIECPKHVEIQILGDNYGNIVYLGERDCSIQRRNQKILE
EAPCSVITQELRNKMGEAAVRAAKYVGYKNAGTIEFLLDKHNNFYFMEMNTRIQVEHPIT
EFITGVDLIKEQIKIAAGMKLSFSQEDIKIQGHSIECRINAEDTLNNFMPCPGRISGLFI
PGGLGIRVDSNIYDGYTIPPTYDSMIAKLIVHGRDRHEAINKMKRALGEFLIDGIKTNID
YHMSILNNEKFISGNYDTGFIGRDHK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaagatattaatagctaatagaggggaaatagcggtacgaattataagagcg
tgtagagaaatgggaatagagacagtagcagtatattctgaaatagataaggaaagtctt
catgttgaaatggctgatgaagctatatgtataggacctccttctccaaaagatagctat
cttaatataaaaaatatattaagtgctacagttttaactggtgcagaagctatacatcca
ggttttggatttttatctgaaaacagtaaatttgctagcatgtgtaaagaatgcaatata
gtttttataggacctgattctgaattaatagataaaatgggtaataagtctaatgctagg
aggattatggaagaggcaggagtagctgttgtaccagggtctaaaaagccaatagagaat
agccaagaggctttagatctagcagaaaaaataggatatcccgttatgataaaagcttca
gccggtggaggaggaagaggtataagagtagttaaacatgaaaaagagctaatagaggct
ataaatactgcaaaaaaagaagcactttcagcttttggagatgatagtatgtatatggaa
aaatacattgaatgtccaaagcacgtggagatacaaatattaggagataattatggaaat
atagtgtacttaggagaaagggattgttctatacaaagaagaaatcaaaaaattttagag
gaagctccatgtagtgtaataacacaggaactaagaaataaaatgggagaagctgcggtg
agagcagctaagtatgtaggatataaaaatgctggaactattgaatttttattagataag
cataataatttttattttatggaaatgaatacaagaattcaagtagaacatcctataaca
gaatttattacgggagtagatttaataaaagagcaaataaaaattgcagctggaatgaaa
ctaagtttttctcaagaagatataaaaatacaaggacattctatcgaatgtagaattaat
gcggaagatactttaaataatttcatgccttgtcctggaagaataagtggattgtttata
ccagggggattaggaatcagagtagatagtaatatatatgatggatatactattccacct
acctatgattctatgatagcaaagttaatagttcatggtagggatagacatgaagctata
aacaaaatgaaaagagctctaggagagtttttaatagatggtataaagaccaatatagat
tatcatatgagtatattaaataatgagaaatttatttctggtaattatgatacaggtttt
ataggtagagaccataagtag
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