Campylobacter coli RM5611: YSU_00565
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Entry
YSU_00565 CDS
T03167
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00900
Terpenoid backbone biosynthesis
ccoi01100
Metabolic pathways
ccoi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YSU_00565
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccoi01006
]
YSU_00565
Enzymes [BR:
ccoi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
YSU_00565
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
YSU_00565
2.5.1.29 geranylgeranyl diphosphate synthase
YSU_00565
Prenyltransferases [BR:
ccoi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
YSU_00565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
NYD-SP28
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AHK74397
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All DBs
Position
complement(120766..121605)
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AA seq
279 aa
AA seq
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MKELFIKHLENHLPKVQSFHPFFNEALAKMLKAGGKHFRAQLLLGVVQNKAPHLIPNALN
AALALEFIHTYSLIHDDLPAMDNADLRRGTPTLHKSYDETTAILVGDALNTEAFLLLSNL
NLKESIKINLIRTLAFNAGINGMILGQAIDCYFEDKKLNLEELEFLHTHKTAKLIAAALK
MGCEICELDEKESEKIYQIGLKLGLIFQINDDIIDETMSEEESGKPSKHDEHKNSFVNLL
GLEKAIQSKENLINECKNDLGDLDANLAHMIKSLMIKYL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaactctttatcaaacatttagaaaatcatctaccaaaagttcaaagcttccat
cctttttttaatgaagctttggcaaagatgctaaaagcaggtggaaaacactttcgtgct
caattactcttaggagttgttcaaaataaagcacctcatcttatccccaatgccctaaac
gcggctttggccttagaatttatccatacttactcgctcatacacgatgatttacctgct
atggataatgcagatttaagacgcggaacgcctactttgcataaaagctatgatgaaact
acagctattttagtaggcgatgctttaaataccgaagcttttttacttctatctaattta
aatttaaaagaaagcattaaaattaatctgattagaactctagcttttaatgcaggaatc
aatggtatgattttgggtcaggctattgattgttattttgaagataaaaaattaaattta
gaagaacttgagtttttacacacacataaaaccgcaaaacttatagcagcggctttaaaa
atgggctgcgaaatttgcgaactcgatgaaaaagaaagcgaaaaaatttatcaaataggt
ctaaaacttggacttatttttcaaatcaatgatgatatcatcgatgaaacaatgagcgaa
gaagaaagtggaaagccaagcaaacatgatgagcataaaaattcttttgtgaatttatta
ggacttgaaaaggctattcaaagtaaggaaaatttgattaatgagtgtaaaaatgatctt
ggcgatcttgatgctaatttagcacacatgattaaaagtttaatgattaaatatttataa
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