Campylobacter coli RM5611: YSU_02995
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Entry
YSU_02995 CDS
T03167
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ccoi
Campylobacter coli RM5611
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoi03400
]
YSU_02995
DNA repair and recombination proteins [BR:
ccoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YSU_02995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_14
AAA_22
AAA_24
ATPase_2
Lon_C
NTPase_1
AAA
SLFN-g3_helicase
nSTAND3
DUF7129
AAA_31
AAA_16
AAA_19
KTI12
RecA
CbiA
ABC_tran
SRP54
ArsA_ATPase
Rad51
NACHT
NPHP3_N
AAA_30
CobU
Viral_helicase1
KdpD
Zeta_toxin
ResIII
ATP-synt_ab
AAA_5
MeaB
GvpD_P-loop
RsgA_GTPase
Elong_Iki1
AAA_18
AAA_33
Bac_DnaA
RNA_helicase
cobW
DAP3
AAA_11
FkbH_N
TK
AAA_28
ParA
TIP49
Zn_ribbon_8
AAA_29
HypA
Motif
Other DBs
NCBI-ProteinID:
AHK74841
LinkDB
All DBs
Position
590908..592248
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AA seq
446 aa
AA seq
DB search
MAKNKILFECQACGNQQSKWLGKCPECGSWDSFIELKSEQIKVLKEIAQASTKASEAICI
EDVELEHFSRCSTDDDELDLVLGGGLVEGSLVLIGGSPGVGKSTLLLKIASNLAKKNKKV
LYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEELHKKNYEILIIDSIQTLYSN
KIASAAGSITQVREITFELMRVSKTYNISTFIIGHITKEGAIAGPRVLEHMVDVVLYFEG
DATKEIRLLRGFKNRFGGTSEVGIFEMTPKGLISAKDLANRFFTRGKATSGSALGVVMEG
SRALVLEVQALVCESSYPKRSATGYEKNRLDMLLALLERKLEIPLGHYDVFVNISGGVRV
NETAADLAVVAAIISSFKNRPLSKDCVFIGELSLNGEIREVFSLDTRLKEAKMQKFKNAI
IPSKPLEDVGLKCFVAKELAQVLEWM
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaattctttttgaatgccaagcttgcggaaatcagcaaagcaaatgg
cttggaaaatgtcctgagtgtggttcttgggatagttttatagaattaaaatctgaacaa
attaaagttttaaaagaaatcgcacaagcaagtacaaaagcaagcgaggctatctgtata
gaagatgtggagctcgagcatttttcaaggtgtagcactgatgatgatgagctggatttg
gttttaggtggagggcttgttgagggttctttggtgcttataggtggtagccctggggtt
ggcaaatctacacttttactaaagattgcttctaatttggctaaaaaaaataaaaaagtt
ctttatgtaagtggagaagaaagtaaggcgcaaatcaaattaagagccgatcgtcttgag
gctaatactcctaatttatttttacttacagagctttgtcttgaaaatattttagaagaa
ttgcataagaaaaattatgaaattcttatcatcgactccatacaaaccttatattcaaat
aaaattgcttcagcggctggaagtatcactcaagtgcgcgagatcacttttgaacttatg
cgagtaagcaaaacttacaatatcagcacttttataataggacatatcaccaaagaagga
gccatagcaggccctagggttttagagcatatggtcgatgtggtgctttattttgaaggg
gatgcaactaaagaaatcaggcttttaaggggttttaaaaatcgctttggtggcacaagc
gaggtgggaatttttgaaatgactcctaagggtttaattagtgcaaaagatttagccaat
cgtttttttacgcgaggtaaagctacttcaggcagtgctttaggtgttgtaatggagggt
tctcgtgctttggttttagaggtgcaagctctagtgtgcgagagttcttatcctaaacgc
agtgccacaggctatgaaaaaaatcgtcttgatatgcttttggctttacttgaaagaaaa
ttagaaattcctcttggtcattatgatgtttttgtaaatattagcggtggagtaagggta
aatgaaactgcggctgatttggctgtggttgcggctattatttctagttttaaaaatcgc
cctttgagtaaggattgtgtttttataggggagttgagtttaaatggagaaataagagaa
gtttttagtcttgatacccgtttaaaagaagctaaaatgcaaaaatttaaaaatgctatt
attccatctaaacctttagaagatgtagggcttaaatgctttgtagccaaagagcttgcc
caagttttagaatggatgtga
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