Campylobacter coli RM5611: YSU_03210
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Entry
YSU_03210 CDS
T03167
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi03030
DNA replication
ccoi03430
Mismatch repair
ccoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YSU_03210
03430 Mismatch repair
YSU_03210
03440 Homologous recombination
YSU_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoi03032
]
YSU_03210
03400 DNA repair and recombination proteins [BR:
ccoi03400
]
YSU_03210
Enzymes [BR:
ccoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YSU_03210
DNA replication proteins [BR:
ccoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YSU_03210
DNA repair and recombination proteins [BR:
ccoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YSU_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_14
AAA_5
AAA_30
AAA_assoc_2
TIP49_C
DNA_pol3_gamma3
AAA_24
AAA_19
LexA_DNA_bind
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHK74884
LinkDB
All DBs
Position
complement(632842..634398)
Genome browser
AA seq
518 aa
AA seq
DB search
MLQALAIKYRPKTFDELIGQKTVSTSLKYALNHNRLAHAYLFSGLRGSGKTSSARIFSRA
LVCDNGPSDTPCGTCKQCLAALEGKHIDIIEMDAASNRGLEDIQALIEQTKYTPSMARFK
IFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLKLPATVLSRTQHFRFKQIPQN
EILNHLKEILNKENVKFEEEALKFVARSGNGSLRDTLTLLDQAIIFCQNDISTSKITDML
GFLDPAKIKEFYHAILTKNKDRVFDFLEELKDYEASSVIDEMLFYLKESFFAKSSEFSTL
IYERFFRILARAKNLICDDDGFTLCVMAFMMMEASHLKEIDTQINEIQKNLTNINSNPEK
QEIKTPIAVEIQKSSPIKNAYEILLEKIYDRDYELGECFKQSTQFISYENEILTISSNAQ
GSNRDKLNKGFKLIQELFKNHFGSDAKIAVQKAIIIDESKLQSLTQELPQQNNEAQSSKK
IDLHSSFNELKQGAKKFDPQEDTKEALREYFGEPKIEN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagccttagcgattaaatacagacctaaaacctttgatgaactcatagggcaa
aaaacagtcagcacaagcttaaaatatgcattaaatcacaatcgcttagctcacgcttat
ctcttttcaggcttacgcggaagcggtaaaacttcaagtgccagaattttttctagagct
ctagtttgtgataatggcccaagtgatactccttgtggaacttgcaaacaatgccttgcc
gcacttgaaggtaaacatatagacatcatagaaatggacgccgctagcaatcgcgggcta
gaagacatacaagctcttattgaacaaactaaatataccccttctatggcaagatttaaa
atctttatcatcgatgaagtgcatatgctaacacctcaagctgctaatgcacttttaaaa
acactagaagaacctccaagctatgtaaaatttatcctagcaaccaccgatcctttaaaa
ttgcccgctaccgtgctttcaaggacgcaacattttcgtttcaagcaaattccgcaaaat
gaaattttaaatcatttaaaagaaattttaaacaaagaaaatgtcaaatttgaagaagaa
gccttgaaatttgtcgcaagaagtggaaatggctctttaagggatactcttaccttgctt
gatcaagctattatcttttgccaaaacgatataagtacgagcaagattactgacatgtta
ggctttttagatcctgctaaaatcaaggaattttaccatgccattttaaccaaaaacaag
gatagagtttttgattttttagaagagcttaaagactatgaagcctcaagcgtgatcgat
gaaatgcttttttatttaaaagaaagtttttttgcaaaaagtagcgaattttcaactctc
atttatgaaagatttttccgtatcctagcaagggcaaaaaatcttatctgtgatgatgat
ggctttacactttgcgtgatggcttttatgatgatggaagcaagtcatttaaaagaaatt
gatacgcaaattaatgaaattcaaaaaaaccttacaaatataaattctaatccagaaaaa
caagaaataaaaacccctatagcagtagaaattcaaaaatcatcaccgattaaaaatgca
tatgaaattttacttgaaaaaatctacgatagggattatgaacttggagaatgttttaaa
caaagcactcaatttataagttatgaaaatgaaattttgactattagctcaaacgcacaa
ggaagcaatcgcgataagcttaataagggctttaaactaatccaagaactttttaaaaat
cattttggctccgatgctaaaattgctgtacaaaaagcaatcattatagatgagagcaaa
ttgcaatccttgacccaagaactacctcaacaaaataatgaagcgcaaagttccaagaaa
atagatcttcactcttcttttaacgagctaaaacaaggagcaaagaaatttgatcctcaa
gaggatacaaaagaagctttaagagaatattttggcgaacccaaaatagaaaactaa
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