Campylobacter coli RM5611: YSU_03480
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Entry
YSU_03480 CDS
T03167
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccoi
Campylobacter coli RM5611
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoi03016
]
YSU_03480 (truB)
Enzymes [BR:
ccoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YSU_03480 (truB)
Transfer RNA biogenesis [BR:
ccoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSU_03480 (truB)
Prokaryotic type
YSU_03480 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHK74936
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All DBs
Position
complement(684894..685712)
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AA seq
272 aa
AA seq
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MNKIFVAFKPAEMSSNAFLGQIKKRYKNKKAGYSGTLDPFAKGVLIVAFGQYTKLFRFLK
KTPKTYQATLWLGVKSLSLDNKNIQEIKLIKAFDIKLLEQIKMELLGKISYTPPQFSAKR
IEGKRAYEFAKRGENIELKSCIMEIFSCKIIHYTHPFLQLELSVSEGAYIRSYCELFAKK
LGINATLSSLERTREGEFFYNHEKSLNVLEYLNLKPNFIKDLTKLENGTKISLEELKFQD
EGFYYIENKKYFSIINIKENKVEYLLNKVEKC
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatttttgttgcttttaaacccgcagaaatgagttctaatgcttttttaggt
cagataaaaaaaagatataaaaataaaaaggcaggttattcaggaaccttagatcccttt
gccaaaggggttttaatagtcgcctttgggcaatacactaagctttttagatttttaaaa
aaaactccaaaaacataccaagcaacactttggcttggggttaaatctctaagtcttgat
aataaaaacatacaagaaataaagcttataaaagcttttgacattaaactcttagaacaa
atcaaaatggaacttttaggaaaaatttcttatactccaccgcaatttagtgctaaaaga
atagaaggtaaaagagcttatgaatttgccaaaagaggtgaaaatatagagttaaaatct
tgtataatggaaattttctcttgcaaaatcatacattatactcatccctttttacagctt
gaattaagcgttagcgaaggagcttatataagatcttattgtgagctttttgctaaaaaa
ttaggtattaatgccactttaagttctcttgagcgcacccgtgagggagaatttttttat
aatcacgaaaaaagtttaaatgtgttagaatatctaaatttaaagcccaatttcattaaa
gatttaacaaaacttgaaaatggcactaaaatatccttggaagaattaaaatttcaagat
gagggtttttattatatagaaaataaaaagtattttagtattataaatattaaagaaaat
aaagtagaatatcttttaaataaggttgaaaaatgttaa
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