Campylobacter coli RM5611: YSU_03785
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Entry
YSU_03785 CDS
T03167
Name
(GenBank) DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YSU_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoi03400
]
YSU_03785
DNA repair and recombination proteins [BR:
ccoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
YSU_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
MSSS
AAA_21
AAA_14
HupF_HypC
SMC_N
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
AHK74992
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Position
739945..742152
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AA seq
735 aa
AA seq
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MNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKRIHELCEVEFPTMPELSN
LDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNLGSWLQKIEFVSGALELCLN
FDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYTKALMPYLIDTQIHLINNLEAL
LVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSTDLVLKNFAHPALKNPKSVSL
EFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQ
NVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEEAACLYSVLISKLIANNLKII
ITTHHKRLAMLLAKNEQVELIAALYDEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
SEAKKLYGEDKENLEELVGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEF
RTSLRNLEFKFHKAIEEAKKTIQLKDMKDKQRSLNKANELKKEIILPSMEQNEELRVGDF
VKYEKIKGKIISISKNDAMVESDGIKLRVSLKLLKKSTPTPKISPKTSISVTKPSNLSVS
LDLHGLRSDEAISRLDKFISDALIAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKDFND
APINQGGFGAKVVRL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatacaaaagaagaattgatctcaaagcttgatttaaacagctatttagaagag
tttaaagccctttttgcaagagataaggagatttttttgcaaggagattctaatctccat
tttaaacgcatacatgagctttgtgaggtggaatttcctactatgccagagcttagcaat
cttgataaagccttagtacatttaagtaagcaaggaattttacatttagatgaaattttt
gaatttgtaaaaatttttcgttattttgaaaagttaaaaaaaataaaactaggaacaaat
ttaggctcttggctacaaaagatagaatttgttagcggggctttggagctttgtttgaat
ttcgatgagaaaggagaattaaaagaaagtttagatgaaagacttgtaaatcttaatgcc
gctctaagattaaaaaatgaaagcataatagctgagtttaagaaattttgctatacaaaa
gctttaatgccttatcttatcgatacacaaatccatcttataaacaatcttgaagccttg
cttgtaagaggcgggtttaatcacgctattaaagcaaaaatcataggtagaagtagtggc
ggtggcttttatatcgtgcctttaagtgttgaaaatttgcaaaatgatatagaaaaaatc
aaaaatcaaaaagaagaaatttattatgaatacgctaaaaatttctcagcttttttagca
aaaaacctaccttttttaaaatttatcaatacagcctttgatctttttgatcattatagt
gctagggttttgcttgctaaaaaaagggattttgaatttgttttgtgtgatcaaagtaca
gatttggttcttaaaaatttcgctcatcctgctttaaaaaatccaaaaagcgtgagtttg
gaatttaaaaaacaagttttaatcatcacaggggtaaatgcaggcggaaaatccatgctt
ttaaaatccatgctaagtgcagcatttttagctaaacatcttttgcctatgcatatcaaa
gcaagtgaaagtaaaattggtacttttaaagaatttgatgccatcatagaagatccgcaa
aatgttaaaaacgacatttcaacttttgcaggaagaatgttgcacttttccaggcttttt
tctaagaaaaatttgcttttaggtatcgatgaaatagagcttggaacagattttgaagaa
gcggcttgtttgtatagtgtgttaatttcaaaactcatagctaataatcttaaaatcatc
atcaccacgcaccacaaacgccttgccatgcttttagcaaagaatgagcaagttgaactc
attgctgctttatatgatgaagagctttcacgcccaaaatatgagtttttaaaaggtact
ataggaaaatcttatgcctttgaaactgctttgcgttatcagattccgccgaatttagtt
agcgaggctaaaaagctttatggcgaggataaagaaaatttagaagagcttgtgggtaaa
aatatcaatcttgaattagaactaaaagctaagcttgaaaatgttgagaaaaaagagcaa
aaagtcgatgaaattttactttctttaaaagagcaaaaagaaaaaaatgaacaagaattt
cgtacgagtttgagaaatttagaatttaaatttcacaaagccatagaagaagctaaaaaa
accatacagcttaaagatatgaaagacaagcaaagaagtcttaataaagccaatgaactt
aaaaaagaaatcatcttgccaagtatggagcaaaacgaagaattgcgtgtgggggatttt
gtaaaatatgaaaaaattaagggtaaaatcataagcatttctaaaaacgatgctatggtt
gaaagtgatgggatcaaacttcgtgtgtctttaaaactgcttaaaaaaagtactcctaca
cctaaaataagtccaaaaacaagtattagtgtaacaaaacctagcaatctaagcgttagc
ttggatttgcatggacttaggagtgatgaagctatttcaaggcttgataaatttatttca
gatgctttgatagcaggatttgacgaggttttaatctatcatggcataggcacaggaaag
cttgcctttgctgtaagagagtttttgaaaactcataaaagtgtcaaggactttaatgac
gcaccgatcaatcaaggtggctttggtgctaaggtggtgagattataa
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