Campylobacter coli RM5611: YSU_04340
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Entry
YSU_04340 CDS
T03167
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00470
D-Amino acid metabolism
ccoi01100
Metabolic pathways
ccoi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSU_04340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YSU_04340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
YSU_04340
Enzymes [BR:
ccoi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
YSU_04340
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
Precursor biosynthesis
Racemase
YSU_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
RBD-FIP
DUF1496
Motif
Other DBs
NCBI-ProteinID:
AHK75099
LinkDB
All DBs
Position
854015..855004
Genome browser
AA seq
329 aa
AA seq
DB search
MSLIKINQKAYESNLKIIAEKIGSFSRLICVFKDNAYGHGAKILAPIASTLGVNFVAVKN
EKEAYELEDFFDNILILSHHPHGKENSKFIYALNDIDKINAYQNDTRIHLKIDTGMHRNG
VCVEDLNEALLKIKCSALKLEGIFAHFAGADEMDASFFIQREKFSKAKDIAKQIYKNLIF
HSHNSPALFRAVKIPEDELCRTGLAQFGYGDESLKKVLSLYAHRLSHRELQIGQSVGYGG
AFSATEKIKIATYDLGYADGLFRYDGKGDLLLANKQKILGKISMDSFSCQDFGKEICVFD
NADVWADFFNTINYEILVKLHPDIPRVLV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaattaaaatcaatcaaaaagcttatgaaagcaatttaaaaattatagctgaa
aaaataggtagcttttcaagattgatttgcgtttttaaagataatgcttatgggcatgga
gcaaaaattttagctccgattgctagtactttgggcgttaattttgtagcagttaaaaat
gaaaaagaagcttatgagctcgaagatttttttgataatattttaattctttctcaccat
ccacatggcaaagaaaattctaaatttatttatgctctaaatgatatagataaaatcaat
gcttatcaaaacgatacaagaatacatcttaaaatagacacaggaatgcatcgcaatgga
gtttgcgttgaggatttaaatgaagctttgttgaaaatcaaatgttctgcattgaagcta
gagggtatatttgcacattttgcaggtgcagatgaaatggatgcaagtttttttattcaa
agggaaaaattttctaaagctaaagatattgctaaacaaatttataaaaatttgatattt
cactcgcataattccccggctttatttagagctgtaaaaatacccgaagatgagctttgt
agaacaggcttagcgcaatttggttatggtgatgaaagtctaaaaaaagttttaagttta
tatgctcatagattaagtcatagagaattacaaataggtcaaagtgtaggttatggtgga
gcttttagtgcgacagaaaaaatcaaaatagctacctatgatttgggttatgcagatggt
ttgtttcgttatgatggcaagggagatttattgctagccaataaacaaaaaattttaggt
aaaatttcaatggatagtttttcttgtcaagattttggaaaggaaatatgtgtgtttgat
aatgcagatgtttgggcagattttttcaatactatcaattatgaaattttagtaaaactc
catcctgatatcccaagagtattggtgtaa
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