Campylobacter coli RM5611: YSU_04385
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Entry
YSU_04385 CDS
T03167
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YSU_04385
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoi01007
]
YSU_04385
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoi03016
]
YSU_04385
Enzymes [BR:
ccoi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
YSU_04385
Amino acid related enzymes [BR:
ccoi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
YSU_04385
Transfer RNA biogenesis [BR:
ccoi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YSU_04385
Prokaryotic type
YSU_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
B3_4
ESP
RhiE-like_linker
Motif
Other DBs
NCBI-ProteinID:
AHK75108
LinkDB
All DBs
Position
860883..863204
Genome browser
AA seq
773 aa
AA seq
DB search
MIITKSWLSDWLDFEDKSLDDIAHTLNSIGIEVDKICTLKVPDKIVVGFVKEKVKHENSD
KLSICQVDVGNEILQIVCGAQNVAQGQFVAVALKGALMPNGMEIKEAKLRGVDSCGMLCS
STELGFEKINDGIMLLDDSIGKLELGKALNSYEIFNDGLIEVELTPNRGDCLSIYGIARD
LAVALNLNLKEKPPFKEGENILGIGRILRLSAEKELNSLYNYRAIELKEKIQTNLLISLR
LAQIENFGKNPIENLLNYATHSTGVLFNAYDLNSFYKENEEFTFSLVKETRGETKISYQD
ELLSVSGIYQEEKFKCKEDSKIIIIEANYTDPMIIADAKMAYKKQDEQTIYRSFRGSEPK
LNLGMDFLLSVLEKNPNLIIYSSSQQIITNKELSNIAISIESINKTIGQEIDKDEVLKIL
KKLGFELIISADGLVNVKAPMHRPDIKNLADICEEVVRIIGIDNIASKGLEFVEKNRLNS
TYKNYKELVELRKKAVANGYFESLHYVLDNEEELKSLGFNPIKLKLINPITAELNTLRTT
LLNHLLNAASLNAKNSKKIIKLFELGVVFGTNNEELNHIAFVHSGYQEEPKISNKAKPEL
VNFYDFLLDLKNIIGDFKLKASKHDILSPYEQADIYLKDLKIGFAGRLHLKIENERDLLK
TYICELDLNLIKHHFKLAKPYSKFPSISRDLSILIPKGFEYEKIKNCIEELDLENLENFR
LVDLYSDASLENSYSLTLKFVFRDMNKTLEEAQVAEHMDKILQSFKEMGLELR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgataattactaaaagttggttaagtgattggttagattttgaagataaaagtttagat
gatatagcgcatacattaaattctataggtatagaagtagataaaatttgcaccttaaaa
gtgccggataaaatcgtagtgggttttgtcaaagaaaaagtaaagcatgaaaattctgac
aaattaagcatttgtcaagttgatgttggaaatgaaatcttgcaaatagtttgtggagcc
caaaatgtcgcacaagggcaatttgtcgcagtggccttaaaaggtgctttaatgccaaat
ggtatggagatcaaagaggctaaattacgaggagtagattcttgcggtatgctttgttct
agcacagaattaggctttgaaaaaatcaatgatggcattatgcttttagacgatagtata
ggcaaattagagcttggaaaagctttaaattcctatgaaatttttaatgatggtttgatc
gaagttgaattaactccaaataggggagattgtcttagtatttatggtatagcacgcgat
ttagcagtggctttgaatttaaacttaaaagaaaaaccaccttttaaagaaggggaaaat
attttaggcataggtcgtattttacgcttgagtgctgaaaaagaattaaacagtctttat
aattacagagctatagaattaaaagaaaaaattcaaaccaatctactcattagtttaaga
ttggcacaaatagaaaattttggaaaaaaccctatagaaaatttattaaattacgcaaca
cactctacaggtgtactctttaatgcttatgatctcaattctttttataaggaaaatgaa
gaatttacttttagcttagtcaaagaaacacggggtgagactaaaatttcttaccaagat
gaacttcttagtgtaagcggaatttaccaagaagaaaaatttaaatgcaaagaagattct
aagataatcatcatcgaggcaaattatactgatccaatgattattgcagatgcaaaaatg
gcttataaaaagcaagatgagcaaactatttatagaagttttagaggaagtgagcctaaa
ttgaatttaggtatggattttttattgagcgttttagaaaaaaatccaaatttgattatt
tatagctcctcacaacaaattataacaaataaggaattgtctaacatagcaatcagtatt
gaaagcattaataagactataggtcaagaaatcgataaggatgaagttttaaaaattctt
aaaaaactaggttttgaacttataatttccgctgatggacttgttaatgttaaagcccct
atgcatcgccctgatataaaaaatctagctgatatttgtgaagaagtagtgcgtattata
ggtattgataatatcgcttcaaaaggtttggaatttgtagaaaaaaatcgtttaaattcc
acttataaaaattataaagagctagtagaacttagaaaaaaagcggtagctaacggatat
tttgaaagtttgcattatgttttagataatgaagaggagctaaaatctcttggttttaat
cctataaaattaaaacttatcaatccaattactgcagagttaaacactctaagaacaacg
cttttaaaccatcttttaaacgcagcaagtttaaatgcgaaaaattctaaaaagattatt
aagctttttgaacttggagtagtttttggaactaataatgaagaactcaatcatatagct
tttgtacattcaggctatcaggaagagcctaaaatttcgaataaagcaaagcctgaattg
gtaaatttttatgattttcttttagatcttaaaaatatcataggagattttaaattaaaa
gcttcaaagcatgatattttaagtccttacgagcaagctgatatttacttaaaagattta
aaaataggttttgcaggtcgcttgcatttaaaaatagaaaacgaaagagatttgctaaaa
acatatatttgcgaacttgatttaaatttgattaaacatcattttaaattggctaaacct
tattctaaattcccaagcattagcagagatcttagcatacttatacctaagggttttgaa
tatgaaaaaattaaaaattgcatagaagaattagatttagaaaatttagaaaatttccgc
ttggttgatttgtatagcgacgcaagccttgaaaattcttatagtttaactcttaaattt
gtttttagagatatgaataaaaccttagaagaggctcaagttgcagaacatatggataaa
attttacaaagctttaaagaaatggggcttgaattaagatga
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