Campylobacter coli RM5611: YSU_06875
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Entry
YSU_06875 CDS
T03167
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00260
Glycine, serine and threonine metabolism
ccoi00460
Cyanoamino acid metabolism
ccoi00630
Glyoxylate and dicarboxylate metabolism
ccoi00670
One carbon pool by folate
ccoi00680
Methane metabolism
ccoi01100
Metabolic pathways
ccoi01110
Biosynthesis of secondary metabolites
ccoi01120
Microbial metabolism in diverse environments
ccoi01200
Carbon metabolism
ccoi01230
Biosynthesis of amino acids
ccoi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YSU_06875
09102 Energy metabolism
00680 Methane metabolism
YSU_06875
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YSU_06875
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YSU_06875
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YSU_06875
Enzymes [BR:
ccoi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YSU_06875
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHK75558
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Position
complement(1351645..1352889)
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AA seq
414 aa
AA seq
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MSLEQFDKEIFDLTNQELVRQCEGLEMIASENFTLPEVMEVMGSVLTNKYAEGYPGKRYY
GGCEFVDEIENLAIERCKKLFNCSFANVQPNSGSQANQGVYAALLNPGDKILGMDLSHGG
HLTHGAKVSSSGKMYESFFYGVELDGRINYEKVREIAHIVKPKLIVCGASAYARIIDFSK
FREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVVSSTTHKTLRGPRGGIIMTNDEE
LAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSEEWKIYAKQVRSNAQALAKVLMDRKY
KLVSDGTDNHLVLMSFLEREFSGKDADLVLGNAGITANKNTVPGETRSPFVTSGLRLGTP
ALTARGFKENEIQIVANYIADILDDIQNTHLQKEIKEQLKTLASNFIIYEKAMF
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagagcagtttgataaggaaatttttgatttaactaaccaagagttagtgcgc
cagtgcgaaggtcttgaaatgatagcaagtgagaatttcactttgcctgaagtaatggaa
gtaatgggaagtgttttaactaacaaatatgcagaaggttatccaggtaagagatattat
ggaggctgtgaatttgtagatgaaatcgaaaatttagctatagaaagatgtaaaaaactt
tttaattgtagttttgcaaatgtgcaacctaattcaggttctcaagctaatcaaggcgtt
tatgctgcacttttaaatccaggtgataaaattttaggaatggatttaagtcatggtgga
catttaacacatggtgcaaaagtaagctcatcgggaaaaatgtatgagagctttttttat
ggtgtagagcttgatggaaggataaactatgaaaaagttagggaaattgctcatattgta
aaaccaaagcttatcgtgtgcggtgcgagtgcttatgctcgtattattgacttttcaaaa
tttagagagattgcggatgaagttggagcttatctttttgcagacattgcacacattgct
ggacttgttgtagcaggtgagcatccaagtccatttcctcatgctcatgtagtaagctct
acaacccacaaaaccttacgtggtccaagaggcggtatcatcatgactaatgatgaagag
cttgctaaaaaaattaattcagctatttttccaggtatccaaggtggaccattgatgcat
gttattgcagctaaagctgtgggatttaaatttaatcttagtgaagaatggaaaatttat
gctaagcaagtaagaagcaatgcgcaagctttagctaaagttttaatggatagaaagtat
aagcttgtaagtgatggaacagataatcatcttgtattgatgagctttttagagcgtgaa
tttagcggaaaagatgcggatttggttttgggtaatgcaggaattacagcaaataaaaat
accgtgcctggcgaaactagaagcccatttgtaacaagtggattaagattaggaacgcct
gcccttacggctagaggttttaaagaaaatgaaattcaaatagttgctaactatatagct
gatattttagatgatattcaaaatactcatttgcaaaaagaaattaaggaacaactcaaa
acccttgcaagtaattttataatctatgaaaaggcaatgttttga
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