Campylobacter coli RM5611: YSU_06880
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Entry
YSU_06880 CDS
T03167
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YSU_06880
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoi01007
]
YSU_06880
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoi03016
]
YSU_06880
Enzymes [BR:
ccoi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
YSU_06880
Amino acid related enzymes [BR:
ccoi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
YSU_06880
Transfer RNA biogenesis [BR:
ccoi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
YSU_06880
Prokaryotic type
Other AARSs
YSU_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AHK75559
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Position
complement(1352886..1354394)
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AA seq
502 aa
AA seq
DB search
MFDNILEQQRIQKANELKNAGVNPYPHFLVKELSLADFKKKFSYIFDTENKRDESISSVI
SGRLKLLRIAGKSIFANIEDENENLQIYFSKDSLGEEKFNLFKKNLEVGDIILAKGFPFV
TKTGEFSLHASEITLATKSIVPLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLTRSKV
VSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELYLKRLVVG
GFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLEKLQLGKI
IEFDGQKIDFSKPFERITYKDALKKYGALSDEIIENKDKILEKLKKDGFEANDKLDLGHL
QAELFDNYVESKLIDPTFITDFPISISPLSRRSDKNSEIAERFELFVCGRELANGFNELN
DPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS
IRDVILFPAMRPLKSELKEDKE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatattttagaacaacaaagaattcaaaaggctaatgagcttaaaaacgca
ggagtaaatccttatccacattttttagttaaagaactttctctagcagattttaaaaag
aaatttagctatatttttgatactgaaaataaacgcgatgaaagtatctcttctgtcatt
tctggacgcttaaagcttcttagaattgctggtaaatctatatttgctaatatagaagat
gagaatgagaatttgcaaatttattttagtaaagattctttaggtgaggaaaaatttaat
ttattcaaaaaaaatcttgaagtgggtgatatcatccttgcaaaaggcttcccttttgtt
actaaaacgggagagtttagcttgcacgcaagtgagatcactttagcaactaaatcaata
gtacctttgcctgaaaaataccatggacttacagatatagaacaaagatatcgtaagcgt
tatgtagatatgattatgaatgcagaggttagaaaagattttctgactcgttctaaagtt
gtaagtttgattcgtcatttttttgaagaaaaaggctttttagaggttgaaactcctatg
atgcaccccattgcaggtggtgcaaatgctaaaccttttgtaacttttcataattcttta
ggggttgagagatttttaagaattgcacctgagctttatttaaaaagacttgtagtgggt
ggttttgaggcagtttttgaaatcaatcgttgttttagaaatgaaggaatggatcttact
cataaccctgaatttactacaattgagttttattgggcttatcataattataaagattta
atggatcttactgaagaactttttgccttgcttttagaaaaattgcaattaggaaaaatc
atagaatttgatggacaaaaaatcgatttttccaaaccttttgagagaattacttataaa
gatgcgcttaaaaagtatggtgctttaagcgatgaaattattgaaaataaagataagatt
ttagagaaattaaaaaaagatggctttgaagcaaatgataagcttgacttagggcatttg
caagccgagcttttcgataattatgtagaaagtaaacttattgatcctacttttatcaca
gattttccaatatctattagcccactttctcgtcgtagtgacaaaaattctgagatagca
gagcgctttgagctttttgtgtgtggtagagaattagccaatggttttaacgaattaaat
gatcctttagatcaatatgaaagatttttaaaacaaattgaggctaaaaatgcaggtgat
gaagaagcgtgtgaaatggatgaagattttgtaaatgctctaggatatggtatgccacca
acagcaggacaaggtataggaatagatagattggtgatgcttttaacaaataaaaaatct
attcgagatgtgatattgtttccagctatgaggccattgaaatcagaattaaaggaggat
aaagaatga
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