Campylobacter coli 76339: BN865_04380c
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Entry
BN865_04380c CDS
T02811
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
ccol
Campylobacter coli 76339
Pathway
ccol02020
Two-component system
ccol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN865_04380c
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN865_04380c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccol03021
]
BN865_04380c
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ccol02035
]
BN865_04380c
Transcription machinery [BR:
ccol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN865_04380c
Bacterial motility proteins [BR:
ccol02035
]
Flagellar system
Flagellar assembly proteins
Stator
BN865_04380c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
ARM_KNTC1_1st
MarR
HTH_24
HTH_5
GerE
COMMD8_HN
TrmB
DAPDH_C
MarR_2
HTH_WhiA
Sigma70_ECF
DUF1492
Sds3
Motif
Other DBs
NCBI-ProteinID:
CDG56687
LinkDB
All DBs
Position
complement(413654..414346)
Genome browser
AA seq
230 aa
AA seq
DB search
MQKEPPKAYAQMIKDEQDQLVLSYMPALRAMAFRLKERLPSSIDVNDLISIGVEEMIKLS
RRYDKEQNDSFWGFARKRVNGAMLDFLRSLDVMSRNNRKIIKDIDILIDEYFREHEEEPD
DEYLAQKLNLDVEKIKEVRTAHAISYTLPIDDQLELYNEDDTLEKLEKEQLLEKIHEVLE
DLKERDQLIIQLYYYEELSLKEISEILEISESRISQIHKKLLKKLRERLV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagagccgcctaaagcttatgctcaaatgataaaagatgaacaagatcagctg
gttttatcttatatgcctgcgcttcgtgcgatggcttttaggttaaaagagcgcttgcct
tctagtatcgatgtaaacgatcttatcagcattggtgttgaagagatgatcaagctttca
cgccgctacgataaagaacaaaatgatagtttttggggatttgctagaaagcgtgttaat
ggcgctatgcttgattttttgcgttctttggacgtaatgagtcgtaacaaccgtaaaatt
attaaagatattgatatcttaatcgatgaatattttagagagcacgaagaagagcctgat
gatgaatatctagctcaaaagcttaatttggatgtagaaaagattaaagaagtgcgcacc
gcacatgctattagctataccctaccgatcgatgatcaattagagctttataatgaagat
gatactttagaaaaattagaaaaagaacaacttttagaaaaaattcatgaagtattagaa
gatcttaaagaacgcgatcaactcattatccaactttattattatgaagaactcagcctt
aaggagatcagtgaaattttagagattagcgaaagtagaatttcacaaattcataaaaaa
cttttaaaaaaacttagagaaaggctagtgtaa
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