Campylobacter coli 76339: BN865_15960c
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Entry
BN865_15960c CDS
T02811
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccol
Campylobacter coli 76339
Pathway
ccol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN865_15960c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccol03021
]
BN865_15960c
03400 DNA repair and recombination proteins [BR:
ccol03400
]
BN865_15960c
Enzymes [BR:
ccol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN865_15960c
Transcription machinery [BR:
ccol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN865_15960c
DNA repair and recombination proteins [BR:
ccol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN865_15960c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CDG57778
LinkDB
All DBs
Position
complement(1535276..1539826)
Genome browser
AA seq
1516 aa
AA seq
DB search
MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENAGDAYYDNESTKKVEYCDVLNEEQYQNLMQR
YENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAATNSEAKKKTIIKRLKVVENFLNS
NLNANTNSEDAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKV
GAKGSHKICTGIDEVMMALESKCLDIHASIQTMIDGRKITTTAGRLIIKSILPDFVTENM
WNKVLKKKDIAALVDYVYKQGGLQITASFLDKLKNLGFEYATKAGISISIADIIVPSDKQ
KAINEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNTLSRDMMKLVEKDKDGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITVEDCGTHEGVEINEITADSSIIETLEERILGR
VIAEDVIDPITNSVLFTEGTLMDEEKARILGESGVKSVNIRTPITCKAKKGICAKCYGIN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKDIVANRRNAAILLVEPKIKAPFKGIINIENIHEDVIVSIKDKKQEAKYIL
RKYDLAKPNELAGVSGSIDGKLYLPYQSGAEVEENESIVEMIKEGWNVPNRIPFASEILV
KDGDPVVQNIKAGEKGTLKFYILKGDGLDRVRDVKKGDVVKEKGFFVVVADENDREAKRH
YIPRESRIEFNDSEEVDFDSIIASAPKQEKSVIAEWDAYNNTIIAEIDGVVSFEDIEAGY
SADEQIDEATGKRSLVINEYLPSGVRPTLIIAGKGDKAVRYQLEPKTVIFVHDGDKISQA
DILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERLIIQ
AEDGTSAEYLIDKSKHIQVREGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQQ
VYRGQGVVISDKHIEVIVSQMLRQVKIIDSGHTKFIEGDLVSRRKFREENERILRLGGEP
AIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIPV
GTGLYGEQNLKLKEQE
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaagtaatagaaatcaaagaagatgcaagacctagggattttgaagca
tttcaacttagacttgcgagtcctgaaaaaattaaatcttggtcttatggtgaagtaaaa
aagccagagactattaattatagaactttaaaaccagaaagagatggtcttttttgtgct
aaaatttttggacctattagagattatgaatgtctttgcggtaaatataaaaaaatgcgc
tttaagggtgttaagtgtgaaaaatgtggggttgaagttgcaaattcaaaagttcgtcgt
tctagaatggggcacattgaacttgtaactccagtagctcatatttggtatgttaattct
cttccaagtcgtataggaacacttctaggcgttaagatgaaagatcttgaacgcgtactt
tactatgaagcttatatcgtagaaaatgcaggagatgcgtactatgataatgaaagcact
aaaaaagtagaatattgcgatgtattgaatgaagagcaatatcaaaatttgatgcagcgt
tatgaaaacagtggttttaaagcaagaatgggtggcgaagttgttcgtgatttattagca
aatttagatcttgtggcgcttttaaaccaacttaaagaagaaatggctgctacaaattca
gaagctaagaaaaaaaccattataaagcgtttaaaagtcgtagaaaactttttaaattcg
aatttgaatgcaaatacaaatagtgaagatgcagtaccaaatcgtcctgaatggatgatg
attacaaatctaccggtattgccacctgatttgcgtcctttggttgctttggatgggggt
aaatttgcagtttctgatgtaaatgatttatatcgccgtgttatcaacagaaacacgcgt
cttaaaaagcttatggagcttgatgcacctgaaattattataagaaacgaaaaaagaatg
cttcaagaagctgtagatgcactttttgacaatggtcgtcgtgctaatgctgttaaagga
gcaaataaacgcccattaaaatctttgagtgaaattatcaaaggaaaacaaggtcgtttt
agacaaaacttgctaggtaaaagggtggatttttcaggtcgtagcgttatcgttgtaggt
ccaaaacttagaatggatcaatgtggcttgcctaaaaaaatggctttagagctttttaaa
ccgcacctattagcaaaacttgaggaaaaaggttatgctactacagtaaaacaagccaaa
aaaatgatagaaaacaaaaccaatgaagtttgggaatgtttagaagaggtggtaaaaggg
catcctgttatgctaaaccgtgctccaactctacataagctttctatccaagctttccat
cctgttttggttgaaggaaaggcaatacagcttcatcctttagtttgtgcggcatttaac
gcggactttgacggagaccaaatggcggtgcatgtgccactttctcaagaagcaattgca
gagtgtaaggttttaatgctttcttctatgaatattcttttgcctgcaagcggaaagtct
gtgactgtaccttctcaagatatggttttgggaatttactatctttctttagaaaaagtg
ggtgcaaaaggttcacataagatatgcacaggtatcgatgaagtaatgatggctcttgaa
agtaaatgtcttgatattcatgctagcatccaaaccatgattgatggtagaaagattact
acaactgcaggaagacttattattaaatctattcttcctgattttgttactgaaaatatg
tggaacaaggtgttaaagaagaaagatattgctgcgcttgtagattatgtgtataaacaa
ggtggtttgcaaattactgcaagtttcttggataaacttaaaaatttaggttttgaatat
gcaactaaagcaggtatttctatatctatcgctgatattatcgttcctagcgacaaacaa
aaggctattaatgaagctaaaaaacaagtaagagaaattcaaaattcttacaatcttggt
ttgatcacttcaggtgagagatataacaaaattattgatatttggaaaagtactaataat
actctttcaagagatatgatgaagcttgttgaaaaagataaagacggctttaactctatt
tatatgatggcggattcaggtgctaggggtagtgcagctcaaatttctcagcttgctgca
atgagaggcttgatgactaaacctgatggttcgatcatcgaaacgcctattatttcaaat
ttccgtgaaggtttgaatgttcttgagtattttatttcaactcacggggctagaaaaggt
ttggcagataccgctcttaagacagcgaatgcgggttatttgacaagaaagcttatcgat
gtagcacaaaatgtaaaaattaccgttgaagattgtggaacacatgagggtgttgaaatc
aatgagattactgcagatagttctattatagaaaccttggaagaaagaattttaggtagg
gttatagctgaagatgtaatcgatcctattacaaattccgtactttttacagaaggtact
ttaatggatgaggaaaaagctagaatactaggcgaaagtggtgtaaaaagcgtaaatatt
cgcactccaatcacttgtaaggctaaaaaaggaatttgtgcaaaatgttacggaattaac
ctaggtgaaggcaagcttgttaaaccaggtgaggcagtaggtatcatttctgctcaatct
attggtgaaccaggaactcagcttacgcttagaactttccatagtgggggaactgcaagt
acggatttacaagatagacaagtaagtgcccaaaaagaaggttttataagattttataat
cttaaaacttataaaaataaagagggtaaagacatagtagctaatcgtagaaatgcagct
attttacttgtagagccaaaaattaaagcaccatttaagggtattattaatatagaaaat
atccacgaagatgtaattgtttctataaaagataaaaaacaagaagcaaaatacattctt
agaaaatacgatcttgctaaaccaaatgaattagcgggcgttagcggaagcattgatgga
aaactttatttaccatatcaaagtggtgctgaagttgaagaaaatgaaagtattgttgag
atgattaaagagggttggaatgttccaaaccgtatcccatttgcaagtgaaattcttgta
aaagatggagatcctgttgtgcaaaatatcaaggcaggagaaaaaggtactttaaaattc
tatattcttaaaggcgatgggcttgatagggtaagagatgttaaaaaaggcgatgtggta
aaagaaaaaggattttttgttgtagttgctgatgaaaatgatagagaggcaaaaagacat
tatatcccaagagagtcaagaatagaatttaacgacagtgaagaagtggattttgattct
ataattgctagtgcaccaaaacaagaaaagtcagttatcgcagaatgggatgcttacaat
aacactattattgcagagattgatggtgtggtaagttttgaagatatagaagcaggctat
agtgcggatgagcaaattgatgaagcaactggtaagcgctcactagtgattaatgaatat
ttaccaagtggggtaagaccaaccttgatcatcgcaggcaaaggcgataaagcagtgcgt
tatcaattagaaccaaaaacagttattttcgttcatgatggtgataaaatttctcaagca
gatattttggcaaagactccaaaagcagcagcgaaatcaaaagatatcactgggggtctt
ccaagagtttcagagctttttgaagcaagaaaaccgaagaatgcagcagtaattgcagag
attgatggtgtggttcgttttgataaacctttgcgttcaaaagaaagattgattatccag
gcagaagatggcacaagtgctgagtatttaatcgataaatcaaaacatattcaagtaaga
gaaggtgaatttattcacgcaggtgagaagttaactgatggagtagtttcaagtcatgat
gtgcttaaaattttaggtgaaaaggccttgcattattacttgatttctgaaattcaacaa
gtttatcgcggtcaaggggttgttatttctgataagcatattgaggttattgtttctcaa
atgttaagacaggttaaaattatcgatagcgggcatactaaatttatcgaaggggatttg
gtttcaagacgcaaattccgtgaggaaaatgagagaattcttagattgggcggagaacca
gctattgctgagcctgtgcttttaggtgttacaagagcagcgataggaagtgatagtgtg
atttctgcagcttcattccaagaaacaacaaaagtacttaccgaagcaagtatcgcgggt
aaatttgactacttagaagacttaaaagaaaatgttattttgggtagaatgattcctgtt
ggaacagggctttatggtgagcaaaatttaaaactcaaagaacaagaataa
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integrated database retrieval system
