Campylobacter coli 76339: BN865_16250c
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Entry
BN865_16250c CDS
T02811
Name
(GenBank) DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccol
Campylobacter coli 76339
Pathway
ccol03030
DNA replication
ccol03430
Mismatch repair
ccol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN865_16250c
03430 Mismatch repair
BN865_16250c
03440 Homologous recombination
BN865_16250c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccol03032
]
BN865_16250c
03400 DNA repair and recombination proteins [BR:
ccol03400
]
BN865_16250c
Enzymes [BR:
ccol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN865_16250c
DNA replication proteins [BR:
ccol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN865_16250c
DNA repair and recombination proteins [BR:
ccol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN865_16250c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
HTH_52
DKNYY
Motif
Other DBs
NCBI-ProteinID:
CDG57806
LinkDB
All DBs
Position
complement(1564571..1565332)
Genome browser
AA seq
253 aa
AA seq
DB search
MSLQQVDQIISILSKQSKPYEWVINEFKKIEELKDYELDLETFELLGLGLTLDKNNIFTL
QTRTKKIKEEIFCIVDIESTGGIKNGQILEIGAVKIKNLQEIDRFSSLVQVKEIPENITE
LTGIDLDMVKDAPSLTKVLNDFRLFLKDSIFVAHNVRFDYGFISKALNECGFGILLNRRI
CTIEFAQCCIESPRYKLDVLKELLGIKNAHHRALNDALAATEIFKYCLGKLPYHIKTTEE
LINFTKTSRIKQK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttacagcaagttgatcagattatttctattttaagcaaacaaagtaagccttat
gaatgggtaatcaatgaatttaagaagattgaagaattgaaagattacgaacttgatcta
gaaacttttgagcttttgggcttgggtttaactttagataaaaataatatttttacccta
caaacgcgcacaaaaaagattaaagaagaaattttttgtattgtagatatagaaagtaca
ggtgggattaaaaacggacaaattttagaaataggtgcagttaagataaaaaatttgcaa
gaaattgatcgttttagctccttagtgcaagtaaaagaaattcctgaaaatattacagaa
cttacagggattgatttggatatggtaaaagatgcacctagtttgactaaggttttaaat
gattttagactttttttaaaagacagtatttttgtcgcgcataatgtgcgttttgattat
ggttttatttctaaggccttaaatgaatgcggttttggaattttacttaatcgtcgtatt
tgcaccatagaatttgcgcagtgctgcatagaaagtccaagatataaactagatgtttta
aaagaacttttagggataaaaaatgcccatcatagagccttaaatgatgctttggctgcg
actgaaattttcaagtattgccttggtaaacttccttatcatatcaaaactaccgaagaa
cttataaattttactaagacttctcgtataaagcaaaaataa
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