Coprococcus comes: I6K69_03605
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Entry
I6K69_03605 CDS
T07118
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccom
Coprococcus comes
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccom03032
]
I6K69_03605 (topA)
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_03605 (topA)
Enzymes [BR:
ccom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6K69_03605 (topA)
DNA replication proteins [BR:
ccom03032
]
Prokaryotic type
DNA Topoisomerases
I6K69_03605 (topA)
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6K69_03605 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Zn_ribbon_8
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
QRT50401
LinkDB
All DBs
Position
complement(686293..688380)
Genome browser
AA seq
695 aa
AA seq
DB search
MARYLVIVESPTKVKTIKKFLGSNYVVMASNGHVRDLPKSQMGVDLEHDFEPKYITIRGK
GEILAGLRKEVKKADKIYLATDPDREGEAISWHLMKALKLEGKKVYRISFNEITKSAVKA
SLKNARDIDMDLVDAQQARRVLDRIVGYKISPVLWAKVKRGLSAGRVQSVALRIIADRED
EIAAFIPEEYWSLDANFKVKGEKKPLTAKFYGTKDEKITIHNEEELHKILADLEEAEYEV
VDVKRGERSKKAPLPFTTSTLQQEASKALNFATSKTMRIAQQLYEGVDIKGSGTVGLITY
LRTDSTRISEEADANARAYVGKAYGEEYVAETTSEQKQKNDGKNIQDAHEAIRPSDVTRV
PAEIKESLTRDQFRLYQLIWKRFVASRMQPAKYETTSVKIGADDYRFTVSASKIIFEGFR
LAYVESDEEKQSGNVMVNSIDKDSELTKESFDYKQHFTQPPAHYTEASLVKTLEELGIGR
PSTYAPTISTIITRRYVAKENKNLYMTELGEVVNNIMKQSFASIVDVNFTAYMEGLLDMI
AEGKVEWKSVISNFYPDLKEAVEKAEKELETVKIEDEVTDVVCEECGRNMVIKYGPHGKF
LACPGFPECRNTKPYLEKIGVACPKCGKDIVLRKTKKGRRYYGCEDNPECDFMSWQKPSE
EKCPKCGSYMVEKGNKLVCGNEQCGFVKNKEKDEK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttatcttgtgattgtagagtcaccgacaaaagtgaagaccataaagaaattt
ctcggcagcaattacgtggtaatggcatcaaacggacatgtaagagatttgccgaaaagt
cagatgggagtagacctggagcatgactttgagccgaaatacattacaatcagaggaaaa
ggtgagatccttgcaggacttagaaaagaagtaaaaaaagcagataagatttatcttgca
actgacccggaccgcgaaggagaagcaatttcctggcacttgatgaaagcacttaaactg
gaaggaaagaaagtataccggatcagctttaacgagatcactaaaagtgcggtaaaggca
tccctgaaaaatgcacgtgatatcgacatggatctggtagatgcgcagcaggcgcgtcgt
gtgctggatcgtatcgtgggatataagatcagtccggttctctgggcaaaagtaaaaaga
ggacttagtgccggtcgtgtgcagtctgtggcacttcgcatcattgcagaccgggaagat
gagatcgcagcgtttattccggaagaatactggtcactggacgccaatttcaaggtaaag
ggagaaaagaagcctcttacagcaaaattctatggaacaaaggatgagaagatcaccatc
cataacgaagaagaactgcataagattcttgcagatctggaagaagcagaatatgaagtg
gtcgatgtaaaacgcggagagagaagtaaaaaagcaccgcttccgtttacgactagtacc
cttcagcaggaggcatccaaagcactgaattttgcaacttcaaagacgatgcgtatcgca
cagcagctttatgaaggtgtggatattaaaggaagtggaacggttggtctgatcacttac
ctgcgtacggattcgacccgtatttctgaggaggcggatgcaaatgcaagagcctatgtt
ggaaaagcctacggagaagagtatgtggcagagactacatcggaacagaagcagaaaaat
gacgggaaaaatattcaggatgcacacgaagccatccgcccgtcagatgttacccgtgtt
ccggcagaaatcaaagaatctcttacaagagaccagttccgtctgtatcagctgatctgg
aagcgttttgtggcgagcagaatgcagccggcaaaatatgagacaacttctgttaaaatt
ggagcagatgattaccgttttacggtatcggcatctaagattatatttgaaggtttccgt
ctggcatatgtggaaagcgatgaggaaaaacagagtggaaatgtaatggtcaatagtatc
gataaagattcagaactgacgaaagaatcctttgactataagcagcatttcacacagcca
cctgcacattacaccgaggcatctcttgtaaagacactggaagaacttggaatcggacgt
ccgagtacctatgcaccaacaatctctacgatcattacaagaagatacgttgcaaaagag
aacaagaatctttatatgacagagcttggtgaagtggtcaataatattatgaagcagtct
ttcgcaagcattgttgatgtcaactttaccgcttatatggaaggacttctggatatgatc
gcagaaggaaaggtagagtggaaatcggttatcagcaatttctatccggatctgaaagaa
gcggttgaaaaagcagaaaaagagctggaaacagttaaaatcgaggatgaggtaaccgat
gtagtctgcgaagaatgtggaagaaatatggttatcaaatacggtccccatggaaagttc
cttgcatgtcccggattcccggaatgccgcaacaccaaaccgtatctggagaaaatcgga
gttgcctgcccgaaatgtggaaaagacattgtattgcgcaagacaaagaaaggcagacgt
tattatggatgtgaggataatccggaatgtgattttatgtcatggcagaagccgtcagaa
gaaaaatgtccgaaatgcggaagttatatggtagaaaagggaaataaacttgtctgcggt
aatgaacagtgtgggtttgttaaaaataaagagaaagatgaaaaataa
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